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splicer
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1
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5
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1.7k
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using BitSeq data as input for spliceR
bitseq
spliceR
9.0 years ago • updated 8.9 years ago
elle
▴ 10
2
votes
4
replies
2.1k
views
Error in SpliceR and GTF file issue
SpliceR
Cuffdiff
updated 8.6 years ago by
deppt002
• 0 • written 8.8 years ago by
mfahim
• 0
0
votes
1
reply
973
views
missing values (NA) in spliceR results
splicer
rnaseq
updated 8.9 years ago by
k.vitting.seerup
▴ 120 • written 9.5 years ago by
hliang
▴ 20
0
votes
1
reply
1.4k
views
Extract sequences corresponding to TCONS IDs from spliceR
splicer
updated 6.3 years ago by
k.vitting.seerup
▴ 120 • written 6.3 years ago by
aditi
▴ 20
1
vote
1
reply
1.4k
views
Running cufflinks for spliceR
Annotation
spliceR
Annotation
spliceR
updated 8.9 years ago by
k.vitting.seerup
▴ 120 • written 9.7 years ago by
hliang
▴ 20
0
votes
1
reply
1.2k
views
results from spliceR
spliceR
updated 8.9 years ago by
k.vitting.seerup
▴ 120 • written 9.1 years ago by
knight2ni
• 0
0
votes
4
replies
1.6k
views
browserSession for Arabidopsis
rtracklayer
Granges
spliceR
updated 8.8 years ago by
Michael Lawrence
★ 11k • written 8.8 years ago by
mfahim
• 0
1
vote
3
replies
1.7k
views
spliceR error with GTF cummeRbund input
splicer
cummerbund
updated 6.8 years ago by
lmanchon
• 0 • written 7.9 years ago by
weisbeal
▴ 10
0
votes
0
replies
1.5k
views
Differential expression workflow for alternative splicing
dexseq
bitseq
spliceR
9.0 years ago
elle
▴ 10
9 results • Page
1 of 1
Recent ...
Replies
Comment: Trying to use enrichGO
by
fernanda.backsouza
▴ 10
Your awnser at Cannabis orgDb solve my problems using enrichGO by far. I'm underdegree biotechnology student, and I learning bioinformatic…
Comment: Trying to use enrichGO
by
Guido Hooiveld
★ 3.9k
It is indeed better. Anyway, did you notice this part in the output from `str(ortologos_filtrados)`: `$Gene.ID : int 115709372 115716460 …
Comment: Trying to use enrichGO
by
fernanda.backsouza
▴ 10
I'm new here, but its better now?
Comment: Trying to use enrichGO
by
Guido Hooiveld
★ 3.9k
That did NOT really improve things...... Likely I wasn't clear enough, but with R-code I meant both the command you typed, as well as the o…
Comment: Trying to use enrichGO
by
fernanda.backsouza
▴ 10
Thank you for yout time guido, 1) When the pvalueCutoff = 1 nothing change. 2) output from > `str(ortologos_filtrados) data.frame':…
Votes
Comment: Trying to use enrichGO
Answer: Cannabis OrgDb
DESeq2: How to find out how well the model fits the data?
Comment: DESeq2 - dispersion estimation when there is none
Comment: DESeq2 a lot of genes showing up as differentially expressed that only have 1 sa
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