Bioconductor Starr

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Starr Starr

updated 13.1 years ago by zacher@lmb.uni-muenchen.de ▴ 50 • written 13.1 years ago by Feseha Abebe-Akele ▴ 30

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Transcription Normalization Yeast probe affy graph tilingArray oligo pdInfoBuilder Starr

updated 14.4 years ago by Tobias Straub ▴ 430 • written 14.4 years ago by Noah Dowell ▴ 410

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802

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Normalization Starr Normalization Starr

updated 14.4 years ago by Martin Morgan 25k • written 14.4 years ago by Noah Dowell ▴ 410

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924

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biomaRt Ringo Starr biomaRt Ringo Starr

updated 14.4 years ago by Wolfgang Huber ★ 13k • written 14.4 years ago by Noah Dowell ▴ 410

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Annotation Starr Annotation Starr

updated 14.4 years ago by zacher@lmb.uni-muenchen.de ▴ 50 • written 14.4 years ago by Noah Dowell ▴ 410

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Normalization Starr Normalization Starr

updated 14.0 years ago by Raphael Gottardo ▴ 40 • written 14.0 years ago by Hans-Ulrich Klein ▴ 330

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Yeast ChIPpeakAnno Starr Yeast ChIPpeakAnno Starr

updated 13.9 years ago by Julie Zhu ★ 4.3k • written 13.9 years ago by Noah Dowell ▴ 410

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Normalization vsn Starr Normalization vsn Starr

updated 13.7 years ago by zacher@lmb.uni-muenchen.de ▴ 50 • written 13.7 years ago by Edwin Groot ▴ 230

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GO Yeast tilingArray Starr GO Yeast tilingArray Starr

13.6 years ago Noah Dowell ▴ 410

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823

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GO Starr GO Starr

updated 12.9 years ago by Martin Morgan 25k • written 12.9 years ago by Yongde Bao ▴ 170

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Starr Starr

updated 12.4 years ago by Kasper Daniel Hansen ★ 6.5k • written 12.4 years ago by Guest User ★ 13k

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Ringo affy tilingarray plot starr

8.8 years ago bruce.moran ▴ 30

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Starr Starr

updated 10.0 years ago by Julie Zhu ★ 4.3k • written 10.0 years ago by Paul ▴ 10

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limma ringo starr

8.7 years ago ashubiochem • 0

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Starr Starr

10.1 years ago Julie Zhu ★ 4.3k

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starr chip-chip

7.0 years ago sudhirjadhao2009 • 0

16 results • Page 1 of 1

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Answer: Different number of exons in reference genome affects DEXSeq analysis by Alejandro Reyes ★ 1.9k

Likely the new annotation that you are using has more annotated isoforms, and thus the exons are splitted into more disjoint exonic bins. I…

Answer: Adding columns to DEXSeqResults object by Alejandro Reyes ★ 1.9k

I'd have a look into the match function, that could give you a mapping between the ids in the dxr1 object and your data frame of gene symbo…

Answer: rlog transformation by Michael Love 41k

It is dependent on the other samples in the dataset.

Answer: ONT long-read RNA sequencing - data analysis options by Michael Love 41k

*"This worked really well for brain but has not work as well for lung as I get #N/A for many padj"* See the vignette for the cause of th…

Answer: DESeq2 Error in `.rowNamesDF<-`(x, value = value): Invalid 'row.names' length by Michael Love 41k

Starting from the very top, do you understand the error? You need to provide sample info that matches 1-to-1 the columns of the counts matr…

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Comment: DEXSeq DEXSeqDataSet count matrix duplication

Comment: Error in champ.load(): The following specified files do not exist

Answer: Error in read.metharray(basenames = files, extended = extended, verbose = verbos

Using GRanges and IRanges to simply get all chromosome data

A: Using GRanges and IRanges to simply get all chromosome data

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Popular Question to Alejandro Reyes ★ 1.9k