Bioconductor Starr

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1.4k

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Ringo affy tilingarray plot starr

8.8 years ago bruce.moran ▴ 30

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1.2k

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Transcription Normalization Yeast probe affy graph tilingArray oligo pdInfoBuilder Starr

updated 14.4 years ago by Tobias Straub ▴ 430 • written 14.4 years ago by Noah Dowell ▴ 410

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800

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Normalization Starr Normalization Starr

updated 14.4 years ago by Martin Morgan 25k • written 14.4 years ago by Noah Dowell ▴ 410

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924

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biomaRt Ringo Starr biomaRt Ringo Starr

updated 14.4 years ago by Wolfgang Huber ★ 13k • written 14.4 years ago by Noah Dowell ▴ 410

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886

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Annotation Starr Annotation Starr

updated 14.3 years ago by zacher@lmb.uni-muenchen.de ▴ 50 • written 14.3 years ago by Noah Dowell ▴ 410

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891

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Normalization Starr Normalization Starr

updated 14.0 years ago by Raphael Gottardo ▴ 40 • written 14.0 years ago by Hans-Ulrich Klein ▴ 330

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1.6k

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Yeast ChIPpeakAnno Starr Yeast ChIPpeakAnno Starr

updated 13.9 years ago by Julie Zhu ★ 4.3k • written 13.9 years ago by Noah Dowell ▴ 410

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Normalization vsn Starr Normalization vsn Starr

updated 13.7 years ago by zacher@lmb.uni-muenchen.de ▴ 50 • written 13.7 years ago by Edwin Groot ▴ 230

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1.6k

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GO Yeast tilingArray Starr GO Yeast tilingArray Starr

13.6 years ago Noah Dowell ▴ 410

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1.2k

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Starr Starr

updated 13.1 years ago by zacher@lmb.uni-muenchen.de ▴ 50 • written 13.1 years ago by Feseha Abebe-Akele ▴ 30

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823

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GO Starr GO Starr

updated 12.9 years ago by Martin Morgan 25k • written 12.9 years ago by Yongde Bao ▴ 170

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Starr Starr

updated 12.4 years ago by Kasper Daniel Hansen ★ 6.5k • written 12.4 years ago by Guest User ★ 13k

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946

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Starr Starr

10.1 years ago Julie Zhu ★ 4.3k

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988

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Starr Starr

updated 10.0 years ago by Julie Zhu ★ 4.3k • written 10.0 years ago by Paul ▴ 10

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limma ringo starr

8.7 years ago • updated 8.6 years ago ashubiochem • 0

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776

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starr chip-chip

7.0 years ago sudhirjadhao2009 • 0

16 results • Page 1 of 1

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Comment: [DiffBind] Obtaining normalization factors by Henry ▴ 10

I see, thank you for your suggestion! I managed to use a separate RLE normalization to obtain the size factors.

Answer: Memory errors using read.bismark? by Peter Hickey ▴ 690

Thanks for sharing an example file. This is a very large non-CpG methylation dataset, which are tricky to work with for a number of reason…

Comment: Reading huge bismark coverage files using bbseq::read.bismark by Peter Hickey ▴ 690

Superficially, your issue is similar to [https://github.com/hansenlab/bsseq/issues/136](https://github.com/hansenlab/bsseq/issues/136). You…

Answer: Reading huge bismark coverage files using bbseq::read.bismark by Peter Hickey ▴ 690

I'm one of the **bsseq** developers. Are you able to share one of your files with me (e.g., via Dropbox, Google Drive, OneDrive, etc.). Tha…

Comment: ComplexHeatmap: add pch to rowAnnotation when the input is a data frame with var by daniel.carbajo • 0

Yeah I think this is the way to go! How can I pass `col_list` here though? `Heatmap` does not accept a list of color vectors... How can I m…

Votes

Comment: [DiffBind] Obtaining normalization factors

Answer: ComplexHeatmap: add pch to rowAnnotation when the input is a data frame with var

Comment: Not fully paired differential gene expression analysis

Answer: GSVA error

Comment: DESeq2 - Plot Nr. Genes vs Variance explained in PCA

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