Bioconductor Subset

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3.0k

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TxDb.Hsapiens.UCSC.hg38.knownGene subset TxDb object

6.7 years ago Ruichao.Zeng ▴ 20

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3.3k

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probe filter subset gene symbol affy

10.9 years ago alakatos ▴ 130

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1.5k

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flowStats newbie split subset flowCore

7.4 years ago yulia.chupalova • 0

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2.0k

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VariantAnnotation subset ScanVcfParam

updated 5.7 years ago by Martin Morgan 25k • written 5.7 years ago by Dario Strbenac ★ 1.6k

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2.8k

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deseq2 maplot subset

updated 8.0 years ago by Michael Love 43k • written 8.0 years ago by rbronste ▴ 60

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1.4k

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R subset DifferentialExpression

updated 3.3 years ago by Basti ▴ 780 • written 3.3 years ago by Manav • 0

6 results • Page 1 of 1

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Comment: BiocParallel (and DESeq2) - wrong args for environment subassignment by Martin Morgan 25k

I see rstudioapi in the `sessionInfo()`. RStudio does not support forked ('multicore') processes. Does the BiocParallel example work when y…

Comment: BiocParallel (and DESeq2) - wrong args for environment subassignment by Michael Love 43k

Given that this is an issue with BiocParallel on your machine and we have a minimal reproducible example, you may want to repost the issue.…

Comment: BiocParallel (and DESeq2) - wrong args for environment subassignment by ATpoint ★ 5.0k

Yes, still it's not reproducible, yet hard to debug. I cannot reproduce myself either.

Comment: BiocParallel (and DESeq2) - wrong args for environment subassignment by Benjamin • 0

Still happening using pre-existing size factors estimating dispersions gene-wise dispersion estimates: 15 workers mean-dis…

Answer: BiocParallel (and DESeq2) - wrong args for environment subassignment by Benjamin • 0

Still happening in a clean install

Votes

Comment: limpa analysis advice

Answer: When to use edgeR or limma

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