Bioconductor Sushi

Showing : sushi • reset

votes

replies

784

views

sushi bed

5.6 years ago maltethodberg ▴ 170

votes

replies

721

views

sushi plotGenes

6.3 years ago portia.mcghan • 0

vote

replies

978

views

sushi

7.6 years ago snamjoshi87 ▴ 40

votes

1.1k

views

sushi plotBed data.frame

8.0 years ago waqasnayab • 0

vote

1.1k

views

sushi plotBed

updated 8.1 years ago by dphansti ▴ 10 • written 8.2 years ago by Dimitris Polychronopoulos ▴ 80

votes

965

views

Sushi

updated 8.1 years ago by dphansti ▴ 10 • written 8.1 years ago by Till ▴ 30

votes

replies

2.0k

views

R sushi

updated 8.2 years ago by dphansti ▴ 10 • written 8.2 years ago by javier.mendoza • 0

votes

replies

1.5k

views

sushi

updated 8.6 years ago by Steve Lianoglou ★ 13k • written 8.6 years ago by Bogdan ▴ 670

8 results • Page 1 of 1

Recent ...

Replies

Comment: Methylation Analysis experiment design using Limma by hortense96 • 0

Thank you very much for your reply and your suggestion, as I'm having a bit of trouble finding information on how to manage this part of th…

Comment: Limma design with continuous and categorical covariates by hortense96 • 0

Hello, I'm trying to do a differential methylation analysis with the Limma package and was wondering if you had any suggestions on how to …

Answer: minfi::read.metharray.exp by Basti ▴ 770

Could you show `list.files("~/Users/clarachretienneau/Desktop/clock epigenetic/PJ1209132_ScanData")` ? There may be a problem related to th…

Comment: DESeq2 - dispersion estimation when there is none by WardDeb • 0

Thank you for the pointers, I'll revert back again to the method section of the paper. As for the negative relationship of the estimated di…

Comment: Error for AnnotationForge makeOrgPackageFromNCBI function by Gayatri • 0

Hello James, How to generate the db? By running the makeOrgPackageFromNCBI() command? I have tried doing that, first by just deleting the …

Votes

Answer: OrgDb for maize

Answer: DESeq2 - dispersion estimation when there is none

Comment: Cannabis and KEGGgraph

Answer: Cannabis and KEGGgraph

Awards • All

Scholar to Gordon Smyth 50k