Bioconductor Svaseq

Showing : svaseq • reset

votes

613

views

RUVSeq svaseq

21 months ago Tongjun • 0

votes

replies

1.1k

views

RNASeq sva svaseq

updated 2.3 years ago by James W. MacDonald 65k • written 2.3 years ago by Bex • 0

votes

replies

778

views

limma sva Leafcutter SVAseq

2.6 years ago georgia.katsoula ▴ 40

votes

755

views

sva svaseq surrogate variable analysis

updated 4.0 years ago by James W. MacDonald 65k • written 4.0 years ago by Mozart ▴ 30

vote

916

views

svaseq sva

5.1 years ago flippy23 • 0

vote

869

views

MEDIPS svaseq sva

updated 5.2 years ago by Lukas Chavez ▴ 570 • written 5.2 years ago by tofukaj • 0

votes

replies

1.5k

views

deseq2 svaseq

5.2 years ago bioinfo • 0

votes

replies

1.4k

views

edger sva svaseq limma

updated 5.9 years ago by Ryan C. Thompson ★ 7.9k • written 5.9 years ago by cats_dogs ▴ 20

vote

replies

3.1k

views

DESeq2 sva svaseq batch effect correction

6.2 years ago L_K • 0

votes

replies

1.1k

views

svaseq batcheffectcorrection

6.5 years ago burcu.atasu • 0

vote

1.5k

views

ruvseq svaseq edaseq

updated 6.5 years ago by davide risso ▴ 950 • written 6.5 years ago by llo ▴ 10

votes

replies

1.2k

views

sva svaseq batch effect batch effects batch effect correction

6.7 years ago vedran.franke • 0

vote

replies

1.7k

views

deseq2 svaseq

updated 6.7 years ago by Michael Love 41k • written 6.7 years ago by gpalidwor ▴ 10

votes

replies

1.7k

views

sva svaseq

updated 6.9 years ago by Guido Hooiveld ★ 3.9k • written 6.9 years ago by wamiqsaifi • 0

votes

replies

2.5k

views

limma sva svaseq

updated 7.2 years ago by Aaron Lun ★ 28k • written 7.2 years ago by Bogdan ▴ 670

votes

replies

1.7k

views

svaseq dexseq

updated 7.2 years ago by Alejandro Reyes ★ 1.9k • written 7.2 years ago by tofukaj • 0

votes

replies

2.2k

views

svaseq combat sva RANseq batcheffect removebatcheffect

updated 7.5 years ago by Jakub ▴ 50 • written 7.5 years ago by amoltej ▴ 10

votes

replies

5.1k

views

deseq2 svaseq

7.6 years ago Akula, Nirmala NIH/NIMH [C] ▴ 190

votes

1.6k

views

deseq2 sva svaseq

updated 7.7 years ago by Michael Love 41k • written 7.7 years ago by szenitha ▴ 20

votes

replies

2.4k

views

sva svaseq batcheffectcorrection

updated 7.7 years ago by Jeff Leek ▴ 650 • written 7.7 years ago by szenitha ▴ 20

vote

replies

3.7k

views

deseq2 sva svaseq pca

7.9 years ago Peter Alto ▴ 10

21 results • Page 1 of 1

Recent ...

Replies

Comment: Methylation Analysis experiment design using Limma by hortense96 • 0

Thank you very much for your reply and your suggestion, as I'm having a bit of trouble finding information on how to manage this part of th…

Comment: Limma design with continuous and categorical covariates by hortense96 • 0

Hello, I'm trying to do a differential methylation analysis with the Limma package and was wondering if you had any suggestions on how to …

Answer: minfi::read.metharray.exp by Basti ▴ 770

Could you show `list.files("~/Users/clarachretienneau/Desktop/clock epigenetic/PJ1209132_ScanData")` ? There may be a problem related to th…

Comment: DESeq2 - dispersion estimation when there is none by WardDeb • 0

Thank you for the pointers, I'll revert back again to the method section of the paper. As for the negative relationship of the estimated di…

Comment: Error for AnnotationForge makeOrgPackageFromNCBI function by Gayatri • 0

Hello James, How to generate the db? By running the makeOrgPackageFromNCBI() command? I have tried doing that, first by just deleting the …

Votes

Answer: OrgDb for maize

Answer: DESeq2 - dispersion estimation when there is none

Comment: Cannabis and KEGGgraph

Answer: Cannabis and KEGGgraph

Awards • All