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biomaRt not working - lazy table error
error
lazy
R
biomaRt
table
updated 27 days ago by
juo5
• 0 • written 5 months ago by
Abhishek
▴ 10
1
vote
2
replies
1.6k
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cn.MOPS - reporting log normalized read counts as table
cn.mops
log
normalized counts
table
updated 6.7 years ago by
Günter Klambauer
▴ 540 • written 6.7 years ago by
falk.zakrzewski
• 0
0
votes
1
reply
1.4k
views
extract RLE normalized table
rle
normalization
table
updated 8.5 years ago by
Steve Lianoglou
★ 13k • written 8.5 years ago by
aiko
• 0
3 results • Page
1 of 1
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Comment: DESeq2 setting significant p-value
by
Dev
• 0
after running DESeq2 does it sort the value on the basis of pvalue, or anything, or does it give the data back in the input format I have …
Comment: DESeq filtering specific to contrasts
by
Carlin95
• 0
But wouldn't this result in a different gene set for each analysis stratification? How can you then compare if maybe gene x comes up in Tim…
Comment: Reading huge bismark coverage files using bbseq::read.bismark
by
jacques.imbert
• 0
Hello, Using nThread = 1L fixed the issue. Thank you for your time and help.
Comment: Error in champ.load(): The following specified files do not exist
by
Basti
▴ 760
The error stems from the Basename column, please see solution here : https://support.bioconductor.org/p/p132482/
Comment: FilterByExpr low counts with small sample size
by
Gordon Smyth
50k
As always, it helps to see code. Are you running `voom` or `voomLmFit`? Did you run `normLibSizes()` in edgeR prior to `voom`? Are you star…
Votes
Comment: Reading huge bismark coverage files using bbseq::read.bismark
Answer: Reading huge bismark coverage files using bbseq::read.bismark
Answer: Reading huge bismark coverage files using bbseq::read.bismark
Answer: How many of my genes from my gene list are in each KEGG pathway?
Comment: Light difference when using coef vs omit a group when compare 3 groups.
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