Bioconductor Tcgaworkflow

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TCGAWorkflow

7 months ago sameerahmadguru • 0

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TCGAWorkflow

17 months ago Begin-R • 0

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TCGAWorkflow

updated 24 months ago by ATpoint ★ 4.4k • written 24 months ago by fatemehfakhari74 • 0

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767

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TCGAbiolinks TCGAWorkflow

2.0 years ago hemangininaik09 • 0

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DifferentialExpression TCGAWorkflow

2.8 years ago Sam ▴ 10

5 results • Page 1 of 1

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Comment: SingleR Label.Ont by Stepah • 0

[Aussie Play][1] cares about its Australian players by offering a safe and secure gaming experience where there is never a dull moment. The…

Comment: ensemblVEP deprecation and how to reproduce by Vincent J. Carey, Jr. 6.7k

What aspect of ensemblVEP are you looking for? The vignette https://bioconductor.org/packages/release/bioc/vignettes/VariantAnnotation/in…

Answer: Help with design matrix for RNA-seq data using edgeR by Gordon Smyth 51k

This forum is intended to help with software usage and syntax rather than to answer research questions, and your question is a definitely a…

Answer: [DESeq2] Normalization of External Test Dataset for Machine Learning (ML) Applic by Michael Love 42k

DESeq2 has a way of fixing the reference pseudo-sample used for normalization. In estimateSizeFactors man page, you will see an argument g…

Comment: [DESeq2] Normalization of External Test Dataset for Machine Learning (ML) Applic by Michael Love 42k

Sorry - I requested this to be posted here, I will answer.

Votes

Answer: Help with design matrix for RNA-seq data using edgeR

Answer: Should tSNE from biol. replicates look alike?

Comment: fgsea stuck in an infinite loop in the middle of the run

Answer: Empty Results from champ.DMP Despite Expected Output

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Popular Question to Matthew Thornton ▴ 380