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Comment: dmpFinder for other objects
by
James W. MacDonald
67k
You are better off using M-values instead of beta values because you are fitting a conventional linear regression, in which case it's bette…
Comment: dmpFinder for other objects
by
neyousha
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Thank you very much James, would you mind explaining why m-values instead of beta values? I have only beta_values available at this point.
Answer: Removing Effect of Covariate in Only a Subset of Samples in a Model Containing A
by
James W. MacDonald
67k
Do you end up with a column of all zeros when you include menopausal status as a factor? Also, please note that `voomLmFit` is the preferre…
Answer: How to conduct maSigPro analysis with only one condition?
by
James W. MacDonald
67k
You have a `data.frame` with 9 columns and are specifying a minimum of 20 observations per gene. Since you don't have 20 observations for a…
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