Showing : tilingarray • reset
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tilingArray- normalizeByReference
probe tilingArray probe tilingArray
15.5 years ago Anjan Purkayastha ▴ 90
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FW: Cannot restore saved data in .Rdata after loading tilingArray - object 'breakpoints' not found
Cancer Breast PROcess tilingArray snapCGH Cancer Breast PROcess tilingArray snapCGH
updated 17.7 years ago by ★ 13k • written 17.7 years ago by ▴ 310
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Chromosome 23 and 24 dropped after run snapCGH processCGH
aCGH Survival Cancer annotate genefilter affy DNAcopy aCGH GLAD tilingArray snapCGH
updated 16.6 years ago by ▴ 40 • written 16.6 years ago by ▴ 110
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Normalization in davidTiling demo
Normalization GO Survival genefilter geneplotter affy vsn tilingArray affyio GO Survival
updated 17.2 years ago by ★ 13k • written 17.2 years ago by ★ 1.3k
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Normalization in davidTiling demo
Normalization GO Survival Biobase genefilter geneplotter affy vsn PROcess tilingArray GO
updated 17.1 years ago by ★ 13k • written 17.1 years ago by ★ 1.3k
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Stuck with Yeast Tiling Array
tilingArray tilingArray
updated 16.6 years ago by ▴ 730 • written 16.6 years ago by ▴ 70
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running time of snapCGH processCGH and runDNAcopy
aCGH Survival CGH annotate genefilter affy DNAcopy aCGH GLAD tilingArray snapCGH aCGH
updated 16.5 years ago by ▴ 230 • written 16.6 years ago by ▴ 110
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combining data from two R arrays
GO Survival annotate genefilter vsn tilingArray GO Survival annotate genefilter vsn
16.5 years ago Richard Harrison ▴ 70
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applicability of tilingArray package
Normalization Yeast affy tilingArray Normalization Yeast affy tilingArray
updated 15.5 years ago by ★ 13k • written 15.5 years ago by ▴ 50
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TilingArray Normalization
Transcription Normalization probe tilingArray Transcription Normalization probe tilingArray
updated 15.4 years ago by ★ 13k • written 15.4 years ago by ▴ 90
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Ringo Plots Only Partially Made
Ringo affy tilingarray plot starr
8.8 years ago bruce.moran ▴ 30
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1
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tiling/SNP microarrays
SNP Coverage tilingArray SNP Coverage tilingArray
updated 17.8 years ago by 21k • written 17.8 years ago by ▴ 10
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Scripts to handle array CGH data files from NimbleGen
CGH tilingArray CGH tilingArray
updated 17.6 years ago by ▴ 40 • written 17.6 years ago by ▴ 140
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1.2k
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Help with Oligo Package: Extracting and Graphing
Transcription Normalization Yeast probe affy graph tilingArray oligo pdInfoBuilder Starr
updated 14.4 years ago by ▴ 430 • written 14.4 years ago by ▴ 410
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1
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1.6k
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tilingArray getting started questions
GO Yeast tilingArray Starr GO Yeast tilingArray Starr
13.6 years ago Noah Dowell ▴ 410
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tilingArray: error message in function segment()
tilingArray tilingArray
15.1 years ago Hui Tang ▴ 20
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undocumented behavior in tilingArray::costMatrix [Scanned]
tilingArray tilingArray
11.7 years ago Du, Yang ▴ 10
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Mapping Affymetrix Arabidopsis Tiling Array 1.0R in Integrated Genome Browser
bioconductor affy tilingarray
7.4 years ago jmtepp • 0
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tilingArray problems
tilingArray tilingArray
15.5 years ago Anjan Purkayastha ▴ 90
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tilingArray problems
Normalization GO tilingArray Normalization GO tilingArray
15.4 years ago Wolfgang Huber ★ 13k
20 results • Page 1 of 1
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Comment: How to retrieve detailed regression results from deseq2 by Weiqian ▴ 10
Hi Michael, thanks for the answer! I'll have a look : )
Comment: DESeq filtering specific to contrasts by Michael Love 41k
It will likely not filter it out, but really the per-dataset details would affect the results.
Comment: DESeq filtering specific to contrasts by Carlin95 • 0
Thanks for clarifying. Could I ask maybe one more thing for my sanity? Let's say you had a multi-factor experiment with contrasts including…
Comment: FilterByExpr low counts with small sample size by Jonathan ▴ 10
Thank you for your answer; However, I have some follow-up questions. Following up in In your [1-2-3 article][1], you say that > "... the…
Comment: DESeq2 a lot of genes showing up as differentially expressed that only have 1 sa by Seyram M. • 0
Thank you very much for your reply! I will do so. Kind regards, Seyram
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Installing/switching between versions of R/Rstudio/Bioconductor on personal machine (Linux | Ubuntu)
A: Docker container with bioconductor and devtools
Answer: OrgDb for maize
Comment: significant difference of p-values with dream() after updating VariancePartition
How to tell and visualize up/down regulation of pathways from clusterprofiler gsea output
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