Bioconductor Time series

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1.9k

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deseq2 time series time course

updated 3.0 years ago by Michael Love 40k • written 3.0 years ago by bsierieb ▴ 10

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503

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scRNA-seq time series

3.2 years ago Bogdan ▴ 660

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633

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deseq2 rnaseq repeated measures time series design formula

updated 3.7 years ago by Michael Love 40k • written 3.7 years ago by Dorien • 0

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677

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transcriptomics gene expression time series plant biology circadian Job

4.0 years ago dezer ▴ 10

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1.1k

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limma microarray time series DEG paired

updated 4.0 years ago by Gordon Smyth 48k • written 4.0 years ago by kawess • 0

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1.8k

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deseq2 Time Series Gene Clustering LRT ATACseq

updated 4.6 years ago by Michael Love 40k • written 4.6 years ago by kaiser.karim • 0

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1.1k

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deseq2 time series remove batch effect

4.6 years ago Nicola • 0

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2.5k

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limma design model.matrix time series splines

updated 4.6 years ago by Aaron Lun ★ 28k • written 4.6 years ago by tleona3 • 0

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841

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limma time series help

updated 4.7 years ago by Aaron Lun ★ 28k • written 4.7 years ago by rm1238 • 0

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1.0k

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deseq2 time series multiple factor design

updated 4.8 years ago by Michael Love 40k • written 4.8 years ago by Jane • 0

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1.5k

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rna-seq time series patient limma-voom

updated 5.0 years ago by Aaron Lun ★ 28k • written 5.0 years ago by aec ▴ 90

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2.7k

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deseq2 ruvseq spike-in time course time series

updated 5.8 years ago by davide risso ▴ 920 • written 5.8 years ago by staceyborrego ▴ 20

12 results • Page 1 of 1

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Comment: Speeding up of DelayedArray::write_block() by Koki ▴ 10

I don't know the details but do you mean using `HDF5RealizationSink` or `TENxRealizationSink` will make it possible to writing sparse multi…

Comment: DelayedArray::read_sparse_block by Koki ▴ 10

Ok, I understood. How about "writing" to HDF5? Are you going to implement `write_block_as_sparse` in `SparseArray` package?

Comment: DelayedArray::read_sparse_block by Hervé Pagès 16k

> So do you means the specification change from DelayedArray's read_sparse_block to SparseArray's read_block_as_sparse will accelerate the …

Comment: DelayedArray::read_sparse_block by Koki ▴ 10

Thanks for your reply. So do you means the specification change from `DelayedArray`'s `read_sparse_block` to `SparseArray`'s `read_block_a…

Comment: DMRcate design by James W. MacDonald 63k

That's what identical context means.

Votes

Answer: What MetaPhlAn3 database was used in cMD 3?

Comment: Speeding up of DelayedArray::write_block()

Answer: DelayedArray::read_sparse_block

Bioconductor 3.18 db0s, OrgDbs, and TxDbs now available

Comment: Timely differentially expressed genes

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