Biostar Time-course

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1.5k

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limma multiple time points time-course differential expression

updated 4.4 years ago by Aaron Lun ★ 27k • written 4.4 years ago by Jake • 0

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1.3k

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rnaseq deseq2 time-course

updated 4.5 years ago by Gavin Kelly ▴ 590 • written 4.5 years ago by inzirio ▴ 10

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842

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deseq2 time-course

updated 3.6 years ago by Michael Love 35k • written 3.6 years ago by rbenel ▴ 20

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502

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masigpro covariates limma differential expression time-course

4.3 years ago veersingh.marwah • 0

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336

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deseq2 Time-course

updated 2.8 years ago by Michael Love 35k • written 2.8 years ago by h.valipour.k • 0

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296

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deseq2 design time-course

updated 2.6 years ago by Michael Love 35k • written 2.6 years ago by Victor Chano • 0

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231

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deseq2 time-serie time-course fold-change

updated 21 months ago by swbarnes2 ▴ 970 • written 21 months ago by Victor Chano • 0

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202

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microarray normalization tscR time-course

updated 18 months ago by Kevin Blighe 3.4k • written 18 months ago by keremwai • 0

8 results • Page 1 of 1

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Comment: MotifDb missing some FlyFactor Motifs by Paul Shannon ▴ 460

We have not heard back from Spencer unfortunately. Gunjan - would you be willing to work with me to update the flybase data in MotifDb?

Answer: DESeq2 differences in Wald and LRT in multi-factorial design by Michael Love 35k

Unfortunately, I have to reserve my time on the support site for software related questions. For consultation about statistical design and …

Comment: Reading large file (15GB) in R by Sean Davis 21k

You don't mention what the issue is with data.table::fread. Do you have enough memory to actually read the file? What error do you get with…

Comment: Error in loading data set by Sean Davis 21k

I'm not sure that we can help with the little information you have supplied. If you could edit your question to include the code you are us…

Comment: Uniform window size for different genes by rbenel ▴ 20

Thanks, I'll keep working on it because the `png("two_transcripts.ong", 240)` still looks a bit weird... thanks though!

Votes

Answer: Joint disperstion estimation for DEXSeq and DESeq2

Answer: Problems to find the pvalues via rowttests

A: How to use subSeq with DNAStringSet and information of GroupedIRanges?

Annotating GRanges with TxDb gene models using plyranges

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