Bioconductor Time-course

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2.2k

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limma multiple time points time-course differential expression

updated 6.2 years ago by Aaron Lun ★ 28k • written 6.2 years ago by Jake • 0

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1.9k

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rnaseq deseq2 time-course

updated 6.4 years ago by Gavin Kelly ▴ 670 • written 6.4 years ago by inzirio ▴ 10

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1.7k

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deseq2 time-course

updated 5.4 years ago by Michael Love 41k • written 5.4 years ago by rbenel ▴ 30

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1.2k

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deseq2 Time-course

updated 4.6 years ago by Michael Love 41k • written 4.6 years ago by h.valipour.k • 0

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817

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masigpro covariates limma differential expression time-course

6.2 years ago veersingh.marwah • 0

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645

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deseq2 time-serie time-course fold-change

updated 3.6 years ago by swbarnes2 ★ 1.3k • written 3.6 years ago by Victor Chano • 0

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560

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deseq2 design time-course

updated 4.4 years ago by Michael Love 41k • written 4.4 years ago by Victor Chano • 0

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476

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microarray normalization tscR time-course

updated 3.3 years ago by Kevin Blighe 3.9k • written 3.3 years ago by keremwai • 0

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Comment: Problem loading HDF5Array in R 4.3.2 by Mike Smith ★ 6.2k

Great, I'm glad it worked. It's frustrating that the binary doesn't work for you; that shouldn't happen! However I'm not sure how to go a…

Comment: It's possible to use clusterProfiler without an annotationDBI package by Guido Hooiveld ★ 3.8k

No, I don't. Confirm that `geneList` has the expected format. What is the outcome of `geneList[1:5]`, `str(geneList)` and `class(geneList)…

Comment: It's possible to use clusterProfiler without an annotationDBI package by Guido Hooiveld ★ 3.8k

Did you try it yourselves? But the answer is yes.

Comment: It's possible to use clusterProfiler without an annotationDBI package by nromerov • 0

Also do you know if the gaphical functions as dotplot, enrichmap and cnetplot works on this generic analysis? still sorry for bothering you

Comment: It's possible to use clusterProfiler without an annotationDBI package by nromerov • 0

Thank you very much for your help iu was really deseperate about this that i wasn't thinking too well yesterday im really gratefull with yo…

Votes

Comment: Problem loading HDF5Array in R 4.3.2

Answer: gseGO input list

Comment: Problem loading HDF5Array in R 4.3.2

Answer: tximport: Error in is(txi, "list") : argument "txi" is missing, with no default

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