Showing : time-course • reset
2
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8
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Limma for differential expression in a time-course
limma multiple time points time-course differential expression
updated 4.7 years ago by ★ 27k • written 4.7 years ago by • 0
1
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3
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1.4k
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[DESeq2] time-course Experimental design
rnaseq deseq2 time-course
updated 4.8 years ago by ▴ 630 • written 4.8 years ago by ▴ 10
1
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7
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954
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Visualization for Time Course "LRT" test in DESeq2
deseq2 time-course
updated 3.9 years ago by 37k • written 3.9 years ago by ▴ 20
1
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3
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381
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Three-factor design with DESeq2
deseq2 Time-course
updated 3.1 years ago by 37k • written 3.1 years ago by • 0
1
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2
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284
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Time-series analysis with control and treated samples, and Fold Change extraction in DESeq2
deseq2 time-serie time-course fold-change
updated 2.1 years ago by ★ 1.0k • written 2.1 years ago by • 0
0
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0
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528
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How to specify covariates in maSigPro analysis (like limma)
masigpro covariates limma differential expression time-course
4.6 years ago veersingh.marwah • 0
0
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1
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324
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DESeq2 analysis of multifactorial RNAseq experiment
deseq2 design time-course
updated 2.9 years ago by 37k • written 2.9 years ago by • 0
0
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1
reply
237
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Input of tscR
microarray normalization tscR time-course
updated 22 months ago by 3.5k • written 22 months ago by • 0
8 results • Page 1 of 1
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Answer: Package name already exists due to previous issue by shepherl 3.1k
This has been resolved. There needed to be a manual intervention by the core team to remove the old issue from the issue tracker database.…
Answer: Package name already exists due to previous issue by James W. MacDonald 59k
You should probably send this question to bioc-devel@r-project.org
Comment: edgeR - how to convert DGELRT and other classes to .csv files by Benjamin • 0
Thank you Aaron. I am wondering if you know how to write the .csv file with both the topTags (statistical analysis) and the original counts…
Answer: error with: .make_splicings <- function(exons, cds, stop_codons=NULL) by James W. MacDonald 59k
That's a very old build, and an old version of the GFF standard. You would be better off getting something more recent. ``` > txdb <- m…
Answer: RPX PXDataset error by Sakimmd7 • 0
Hi Gianluigi, I am doing the same course currently and stumbled upon the same issue. After trying out different things, I realised the …
Votes
Comment: Merging two plated in R
Answer: Merging two plated in R
Answer: Merging two plated in R
A: Can we use glmQLFit instead of glmFit and then glmLRT in edgeR
A: Can we use glmQLFit instead of glmFit and then glmLRT in edgeR
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