Bioconductor Timecoursedata

Showing : timecoursedata • reset

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1.3k

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timecoursedata limma

7 months ago • updated 4 months ago triZZla • 0

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865

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time-series DESeq2 RNASeq timecoursedata TimeCourse

updated 8 months ago by ATpoint ★ 4.0k • written 8 months ago by Debebe • 0

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481

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timecoursedata RNASeqData TimeCourse DESeq2

updated 9 months ago by Michael Love 41k • written 9 months ago by georgii.vdovin • 0

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471

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timecoursedata edgeR

updated 13 months ago by Gordon Smyth 50k • written 13 months ago by boczniak767 ▴ 720

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624

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DESeq2 timecoursedata replicates

updated 13 months ago by Michael Love 41k • written 13 months ago by fepesanz8 • 0

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603

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DESeq2 time-series timecoursedata timecourse multifactorial

updated 16 months ago by Michael Love 41k • written 17 months ago by arshad1292 • 0

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945

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QTL fourier TimeSeriesExperiment timecoursedata

3.0 years ago Daphne • 0

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1.4k

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limma proteomics TMTlabeling timecoursedata

updated 3.4 years ago by SamGG ▴ 350 • written 3.5 years ago by maleknias • 0

8 results • Page 1 of 1

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Comment: How to retrieve detailed regression results from deseq2 by Weiqian ▴ 10

Hi Michael, thanks for the answer! I'll have a look : )

Comment: DESeq filtering specific to contrasts by Michael Love 41k

It will likely not filter it out, but really the per-dataset details would affect the results.

Comment: DESeq filtering specific to contrasts by Carlin95 • 0

Thanks for clarifying. Could I ask maybe one more thing for my sanity? Let's say you had a multi-factor experiment with contrasts including…

Comment: FilterByExpr low counts with small sample size by Jonathan ▴ 10

Thank you for your answer; However, I have some follow-up questions. Following up in In your [1-2-3 article][1], you say that > "... the…

Comment: DESeq2 a lot of genes showing up as differentially expressed that only have 1 sa by Seyram M. • 0

Thank you very much for your reply! I will do so. Kind regards, Seyram

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Installing/switching between versions of R/Rstudio/Bioconductor on personal machine (Linux | Ubuntu)

A: Docker container with bioconductor and devtools

Answer: OrgDb for maize

Comment: significant difference of p-values with dream() after updating VariancePartition

How to tell and visualize up/down regulation of pathways from clusterprofiler gsea output

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Popular Question to James W. MacDonald 65k