Showing : timecoursedata • reset
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Time-series RNA-seq analysis using DESeq2
time-series DESeq2 RNASeq timecoursedata TimeCourse
updated 2.3 years ago by ★ 5.0k • written 2.3 years ago by • 0
3
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13
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Timely differentially expressed genes
timecoursedata limma
2.3 years ago • updated 2.0 years ago triZZla • 0
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3
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Find DEPs among TMT labeling proteom time course data by limma
limma proteomics TMTlabeling timecoursedata
updated 5.1 years ago by ▴ 360 • written 5.1 years ago by • 0
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Job: Biostatistics Research Associate, York, UK
QTL fourier TimeSeriesExperiment timecoursedata
4.7 years ago Daphne • 0
4
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9
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1.4k
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Can DESeq2 rlog normalized matrix reflects time course result directly?
DESeq2 timecoursedata GeneExpression
updated 19 months ago by ★ 5.0k • written 19 months ago by • 0
2
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1
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1.4k
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DESeq2 time course using fitted splines
RNASeqData TimeCourse DESeq2 timecoursedata
updated 17 months ago by 43k • written 2.4 years ago by • 0
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Interpreting results from DESeq2 time-series multifactorial data analysis
DESeq2 time-series timecoursedata timecourse multifactorial
updated 3.0 years ago by 43k • written 3.1 years ago by • 0
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2
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DESeq2 replicates in time course data
DESeq2 timecoursedata replicates
updated 2.8 years ago by 43k • written 2.8 years ago by • 0
0
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2
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999
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Timecourse RNASeq analysis
DESeq2 ImpulseDE2 timecour timecoursedata moanin
19 months ago Aurora • 0
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0
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Plot profiles for each group - spline analysis in edgeR
timecoursedata edgeR
updated 2.7 years ago by 53k • written 2.7 years ago by ▴ 740
10 results • Page 1 of 1
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Comment: Bioinformatician at the Lausanne University Hospital by eja.ger.m • 0
For individuals looking to improve communication and collaboration in demanding medical or research environments like the Genetic Medicine …
Answer: NUPOP usage by shepherl 4.2k
You should read the documentation in the package especially the package vignette https://bioconductor.org/packages/release/bioc/html/NuPoP.…
Comment: How can I correctly use phyloseq with Docker? by fnfgame • 0
In a rocker image, this error usually means the Bioconductor install happened as root but the runtime library paths used by the shiny user …
Comment: DECIPHER DesignProbes unable to design FISH-probes by Erik Wright ▴ 150
Are the sequences aligned (i.e., the same width) before running `TileSeqs()`?
Comment: BiocParallel (and DESeq2) - wrong args for environment subassignment by Michael Love 43k
BTW, I tested with no issue on MacOS ARM on our previous github issue.
Votes
C: DESeq2 Following RSEM
Upcoming Ensembl API and data access changes - new blog post available
Comment: Highly similar RNA-seq samples in PCA - pooling or technical duplication?
Answer: Large logFC but somewhat high FDR
Comment: upstream git branches of bioc-release
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