Showing : tkWidgets • reset
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getBioC v1.2.22 & [R] v1.6.2
annotate edd genefilter geneplotter rhdf5 multtest ROC tkWidgets reposTools affy vsn
updated 21.1 years ago by ★ 3.9k • written 21.1 years ago by ▴ 70
0
votes
1
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1.3k
views
Error loading tcltk for tkWidgets and widgetTools on duo Intel Mac under OS X
Cancer tkWidgets widgetTools Cancer tkWidgets widgetTools
updated 17.6 years ago by ▴ 150 • written 17.6 years ago by ★ 2.9k
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0
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peer review process/DATE CORRECTION
Biobase annotate edd genefilter geneplotter rhdf5 multtest ROC tkWidgets affy AnnBuilder
22.1 years ago Vincent J. Carey, Jr. 6.7k
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7
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1.7k
views
A question
cdf tkWidgets cdf tkWidgets
updated 22.0 years ago by ▴ 150 • written 22.0 years ago by ▴ 20
0
votes
1
reply
1.6k
views
Problems with url/download and http_proxy
Biobase annotate edd geneplotter tkWidgets ASSIGN Biobase annotate edd geneplotter
updated 21.9 years ago by ▴ 50 • written 21.9 years ago by ▴ 460
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2
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1.1k
views
Trouble with affy version 1.2.1
Normalization rhdf5 tkWidgets affy Normalization rhdf5 tkWidgets affy
21.6 years ago Isaac Neuhaus ▴ 360
0
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0
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834
views
Re: Bioconductor Digest, Vol 2, Issue 32
cdf Biobase tkWidgets affy GENE.E cdf Biobase tkWidgets affy GENE.E
21.0 years ago Michael McDonald ▴ 30
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votes
4
replies
1.2k
views
Enabling the widget option
tkWidgets affy widgetTools tkWidgets affy widgetTools
21.3 years ago Tapan Mehta ▴ 270
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4
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1.0k
views
Recent changes to Bioconductor packages
MultiChannel tkWidgets affy Rgraphviz MultiChannel tkWidgets affy Rgraphviz
21.2 years ago • updated 21.1 years ago madman@jimmy.harvard.edu ▴ 850
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0
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589
views
Re: memory problem with Affy
tkWidgets tkWidgets
21.2 years ago Sylvia Merk ▴ 50
0
votes
2
replies
1.2k
views
Problems encountered using affy in R
Biobase annotate genefilter multtest ROC tkWidgets affy vsn Biobase annotate genefilter
updated 21.2 years ago by 6.7k • written 21.2 years ago by ▴ 20
0
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1
reply
780
views
Cannot load widgetTools package
Biobase tkWidgets reposTools Biobase tkWidgets reposTools
updated 21.1 years ago by 6.7k • written 21.1 years ago by ▴ 10
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3
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1.2k
views
Recent changes to Bioconductor packages
Biobase Ruuid DynDoc tkWidgets affy graph Rgraphviz AnnBuilder RBGL PROcess Biobase
21.1 years ago • updated 21.0 years ago madman@jimmy.harvard.edu ▴ 850
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5
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1.3k
views
Error message when trying to ReadAffy with widgets function: help, please?_Part 2
Cancer tkWidgets Cancer tkWidgets
updated 20.9 years ago by ▴ 360 • written 20.9 years ago by ★ 2.9k
0
votes
1
reply
1.1k
views
Problems accessing the Milan package through the vignettes Explorer
Cancer Biobase annotate edd geneplotter multtest tkWidgets affydata vsn graph hexbin
updated 20.9 years ago by ★ 2.9k • written 20.9 years ago by ▴ 130
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1
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1.0k
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Biobase load failed
Biobase genefilter tkWidgets Biobase genefilter tkWidgets
updated 20.6 years ago by 6.7k • written 20.6 years ago by ▴ 10
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0
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1.2k
views
affy packages on Linux doesn't get installed
DynDoc tkWidgets affy affyPLM DynDoc tkWidgets affy affyPLM
20.4 years ago juliab@stat.berkeley.edu ▴ 10
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votes
3
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2.3k
views
trouble installing "affy" package
Biobase tkWidgets affy Biobase tkWidgets affy
20.2 years ago Jeffrey Chang ▴ 40
0
votes
0
replies
828
views
Re: trouble installing "affy" package
Cancer Biobase tkWidgets affy Cancer Biobase tkWidgets affy
20.2 years ago Wolfgang Huber ★ 13k
0
votes
1
reply
1.0k
views
where to get R 1.9.0
tkWidgets affy tkWidgets affy
updated 20.1 years ago by ★ 5.5k • written 20.1 years ago by ▴ 210
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0
replies
1.0k
views
batch vs interactive behavior of reposTools()
Biobase DynDoc tkWidgets widgetTools Biobase DynDoc tkWidgets widgetTools
19.4 years ago Marion Hakanson ▴ 50
0
votes
1
reply
1.0k
views
problems with affy & widgets
Pharmacogenomics tkWidgets affy Pharmacogenomics tkWidgets affy
19.3 years ago Edoardo Saccenti ▴ 130
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9
replies
1.9k
views
Getting LimmaGUI to run
tkWidgets widgetTools limmaGUI widgetInvoke tkWidgets widgetTools limmaGUI widgetInvoke
18.8 years ago chris umbricht ▴ 110
0
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1
reply
792
views
GOstats/tkWidgets/gcrma conflict
tkWidgets gcrma matchprobes GOstats tkWidgets gcrma matchprobes GOstats
updated 18.4 years ago by 25k • written 18.4 years ago by ▴ 80
0
votes
1
reply
906
views
ReadAffy question
GO Ruuid DynDoc annotate genefilter multtest tkWidgets reposTools affy widgetTools limma
updated 18.3 years ago by 65k • written 18.3 years ago by ▴ 890
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votes
3
replies
1.3k
views
widgetTools wFuns problem
DynDoc tkWidgets reposTools widgetTools DynDoc tkWidgets reposTools widgetTools
updated 18.2 years ago by ★ 2.9k • written 18.2 years ago by ▴ 80
0
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12
replies
1.9k
views
Some Genefilter questions
GO Survival cdf genefilter geneplotter tkWidgets affy affydata widgetTools gcrma affyPLM
updated 17.4 years ago by ★ 5.5k • written 17.4 years ago by ▴ 460
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1
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1.1k
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Problem with limma2biomaRt and MBNI custom CDF
Annotation GO cdf DynDoc genefilter tkWidgets affy graph limma RBGL biomaRt Category
updated 17.2 years ago by 65k • written 17.2 years ago by ▴ 300
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1
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1.1k
views
paired design, LIMMA
cdf tkWidgets affy widgetTools limma affyio cdf tkWidgets affy widgetTools limma affyio
updated 17.0 years ago by ▴ 470 • written 17.0 years ago by 50k
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1
reply
1.2k
views
tcl/tk and biocLite
Genetics Cancer tkWidgets widgetTools marray Genetics Cancer tkWidgets widgetTools marray
updated 17.0 years ago by ★ 7.4k • written 17.0 years ago by ▴ 30
0
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0
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902
views
tcl/tk dependency of biocLite
Genetics Cancer tkWidgets widgetTools marray Genetics Cancer tkWidgets widgetTools marray
17.0 years ago grischa tödt ▴ 30
0
votes
0
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998
views
Bioconductor web page
GO Cancer tkWidgets reposTools widgetTools simpleaffy affyQCReport affyio GO Cancer
16.9 years ago Seth Falcon ★ 7.4k
0
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0
replies
907
views
Error loading tcltk for tkWidgets and widgetTools on duo Intel Mac under OS X
Ruuid tkWidgets graph GOstats Ruuid tkWidgets graph GOstats
16.8 years ago Michael Parisi ▴ 10
0
votes
1
reply
982
views
Error loading tcltk for tkWidgets and widgetTools on duo Intel Mac under OS X
Cancer Ruuid tkWidgets graph GOstats Cancer Ruuid tkWidgets graph GOstats
updated 16.8 years ago by ▴ 10 • written 16.8 years ago by ★ 7.4k
0
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1
reply
1.6k
views
create an new AnnotatedDataFrame
Survival Yeast Biobase genefilter tkWidgets marray convert arrayMagic affyio Survival
updated 16.7 years ago by 25k • written 16.7 years ago by ▴ 30
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1
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3.2k
views
RE : create an new AnnotatedDataFrame
Annotation Survival Yeast Biobase genefilter tkWidgets marray convert arrayMagic affyio
updated 16.7 years ago by 25k • written 16.7 years ago by ▴ 30
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8
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3.2k
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Reading Agilent files using read.maimages
Survival DynDoc genefilter tkWidgets affy vsn marray convert ArrayExpress Survival affy
updated 16.7 years ago by ▴ 20 • written 16.7 years ago by ▴ 100
0
votes
2
replies
1.3k
views
ReadAffy widget fails for Annotated DataFrame
Microarray DynDoc tkWidgets affy widgetTools Microarray DynDoc tkWidgets affy widgetTools
updated 16.6 years ago by 25k • written 16.6 years ago by ▴ 140
0
votes
2
replies
1.1k
views
Problem with tkWidgets
tkWidgets tkWidgets
updated 12.6 years ago by 65k • written 12.6 years ago by ★ 13k
0
votes
2
replies
2.6k
views
[R] Error in setMethod("combine"... was - Error when installing globaltest package
Infrastructure Cancer Biobase tkWidgets globaltest BiocInstaller BiocGenerics Cancer
updated 11.1 years ago by 25k • written 11.1 years ago by ▴ 40
0
votes
1
reply
900
views
objNameToList() on some particular list of objects in parent frame
tkWidgets xml kegggraph
updated 7.0 years ago by 65k • written 7.0 years ago by • 0
41 results • Page 1 of 1
Recent ...
Replies
Comment: get BM error by James W. MacDonald 65k
I believe you need NCBI Gene IDs for KEGG, in which case you may need to map. The three genes you have shown here don't map, and of those t…
Comment: get BM error by Fara • 0
Thank you for your response. The primary reason for translating Ensembl IDs into Entrez Gene IDs is to perform KEGG (Kyoto Encyclopedia of…
Comment: Error for AnnotationForge makeOrgPackageFromNCBI function by James W. MacDonald 65k
That's weird. I don't have any problem at all generating the `OrgDb` on my box. How big is the gene2pubmed.gz file? I get this: ``` gzip -…
Answer: get BM error by James W. MacDonald 65k
The genes you present are orthologous mappings from D. rerio to other teleost fishes, so it is probably going to be difficult to map to NCB…
Answer: How to retrieve gene ontology GO class from gene list? by James W. MacDonald 65k
You can also use a combination of the `org.Hs.eg.db` and `GO.db` packages. ``` > library(GO.db) > library(org.Hs.eg.db) > go <- m…
Votes
Answer: get BM error
Answer: Use of negative binomial model for exponential decay rate estimation using DESeq
Comment: Different Shrunk Log2FC according with reference
Reproducibility issue with scran together with lapply and BiocParallel
C: SGSeq: moving toward diffex from SGSeq analysis
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