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News: RNA-seq analysis with Bioconductor Carpentries workshop, Boston, Jul 31-Aug 1
Bioconductor Event Community Training
11 months ago Maria Doyle ▴ 70
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News: Include your Bioconductor tutorial in Smörgåsbord 2023, May 22-26!
Training Bioconductor Event Community Tutorial
12 months ago Maria Doyle ▴ 70
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News: Bioconductor joins GTN Smörgåsbord online training event, May 22-26, 2023!
Training Bioconductor Event Community News
12 months ago Maria Doyle ▴ 70
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News: BioCAsia, 5-6th December 2019, Sydney, Australia
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4.9 years ago Peter Hickey ▴ 740
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News: BioCAsia, 29-30th November 2018, Melbourne, Australia
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updated 5.4 years ago by 50k • written 5.7 years ago by ▴ 170
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News: LAST CHANCE: May Institute 2018 - Computation and statistics for mass spectrometry and proteomics at Northeastern University in Boston
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6.2 years ago mnchoi67 ▴ 40
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News: May Institute 2018 - Computation and statistics for mass spectrometry and proteomics at Northeastern University in Boston
bioconductor training course msstats proteomics News
6.3 years ago mnchoi67 ▴ 40
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News: Course: Statistics and Computing in Genome Data Science, July 10-15, 2016
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8.2 years ago Martin Morgan 25k
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Help with neuroblastoma working group
Training
updated 8.7 years ago by 6.7k • written 8.7 years ago by ▴ 10
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Job: Services/Outreach orientend bioinformatics positions at EMBL - Heidelberg
EMBL services workflows training Job
9.2 years ago • updated 9.1 years ago Wolfgang Huber ★ 13k
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News: NGS data analysis training courses at EMBL-EBI
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9.3 years ago gr231 ▴ 10
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Beginner's guide to DESeq2 pdf link broken
deseq2 training
updated 9.5 years ago by 41k • written 9.5 years ago by • 0
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News: Course Announcement - Next Generation Data Analysis with R/Bioc (Dec 5-8, 2014)
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9.5 years ago Thomas Girke ★ 1.7k
13 results • Page 1 of 1
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Answer: Citation for edgeR user guide by Gordon Smyth 50k
Thanks for thinking about how to cite edgeR. Citations are indeed the main way by which the edgeR authors get credit for their work. The Us…
Comment: DESeq2 output used for PCA plot on R studio by swbarnes2 ★ 1.3k
You are just making up data? What is the point of this exercise?
Comment: How to retrieve gene ontology GO class? by James W. MacDonald 65k
What do you mean by 'the information'? Do you have things in particular that you want?
Comment: minfi::read.metharray.exp by clacarion • 0
I think its work with `read.metharray.sheet` ```r > sheet <- read.metharray.sheet("/Users/clarachretienneau/Desktop/clock_epigenetic/PJ120…
Comment: minfi::read.metharray.exp by clacarion • 0
Thank you for your response Basti ! I add all the idat files in a unique folder called "idat" and add it in my path ```r > list.files("…
Votes
Use of negative binomial model for exponential decay rate estimation using DESeq (or similar)
Answer: How to correct for age, sex, etc. from an RNA-seq data in DESeq2.
Answer: minfi::read.metharray.exp
Comment: Trying to use enrichGO
Answer: Cannabis OrgDb
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