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News: Translation Hackathon (community event) announcement
event translation community
22 months ago kozo.nishida • 0
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753
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Bioconductor: Ambiguous Amino Acids & Gap Sequences
Translation Biostrings
2.7 years ago emmanuel.verde2939 • 0
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1
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934
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aaVariation function bug (Methonine instead of Leucine)
customprodb translation
updated 5.7 years ago by ▴ 50 • written 6.0 years ago by • 0
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1
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825
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Point mutation to corresponding amino acid
point mutation aminoacid translation
updated 6 months ago by • 0 • written 5.8 years ago by • 0
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2
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5.8k
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translate DNA sequence to Amino acid sequence in a dataframe
translation
updated 7.2 years ago by 25k • written 7.2 years ago by ▴ 20
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How to reverse translate amino acid sequence into mammalian codon optimised cDNA
convert translation
written 9.4 years ago by ▴ 20
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987
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Translate to aminoacid, align pairwise and un-translate back to DNA
translation pairwisealignment
7.7 years ago igferres • 0
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How to find the amino acid codon corresponding to a translated genomic position
genomicranges genomicfeatures translation
updated 3 months ago by ▴ 10 • written 8.4 years ago by ▴ 10
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Job: Associate Scientist - NGS Informatics @ AstraZeneca (Metro Boston, MA)
cancer translation ngs genomics Job
9.1 years ago jhjohnsn • 0
9 results • Page 1 of 1
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Answer: Reproducibility issue with scran together with lapply and BiocParallel by Aaron Lun ★ 28k
IIRC **BiocParallel** switches to a different RNG when inside its own functions like `bplapply` - specifically L'Ecuyer-CMRG, as opposed to…
Comment: DESeq2 output used for PCA plot on R studio by swbarnes2 ★ 1.3k
This looks terrible for RNASeq data, because it's not RNASeq data. It's a matrix of pretty random numbers, which you know because you poste…
Comment: DESeq2 output used for PCA plot on R studio by Aaliya • 0
I had taken this code from internet, but after reading about it and I did on my own, I would be making a post to ask for the suggestions if…
Comment: featureCounts reports an error:"featureCounts: input-files.c:2890: SAM_pairer_ge by shuwangxinze1996 • 0
Hello, I used 48 cpus and 320G of memory to run this program. My bam files size are 7-9G, wonder how much CPU and memory is enough? Thank …
Comment: DESeq2 output used for PCA plot on R studio by Kevin Blighe ★ 3.9k
This comment helps.
Votes
A: Are published RNA seq data analyses often wrong in calculating p-values and FDR?
A: How to explain how DESeq2 works to someone with zero bioinformatics background?
Answer: Interpret plot from DiffBind
Answer: How to retrieve gene ontology GO class from gene list?
Answer: How to retrieve gene ontology GO class from gene list?
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