Log In
Sign Up
about
faq
Ask a question
Latest
News
Jobs
Tutorials
Tags
Users
New Post
Latest
News
Jobs
Tutorials
Tags
Users
Log In
Sign Up
About
Limit
all time
today
this week
this month
this year
Unanswered
All posts
Sort
Update
Answers
Bookmarks
Creation
Replies
Rank
Views
Votes
Showing :
twochannel
•
reset
5
votes
10
replies
1.5k
views
Limma Design Matrix for two channel agilent arrays (direct experimental design)
Limma
limma design matrix
agilent
twochannel
8.2 years ago
pm2015
• 0
3
votes
9
replies
1.9k
views
Single channel analysis of two-color agilent array using limma
agilent
limma
twochannel
microarray
updated 8.5 years ago by
Gordon Smyth
50k • written 8.5 years ago by
pm2015
• 0
3
votes
8
replies
1.3k
views
Design matrix for a two-color experimental design testing for time effect on 3 treated cell-lines, each with its own time=0 control
limma
microarray
design matrix
twochannel
updated 5.6 years ago by
Gordon Smyth
50k • written 5.6 years ago by
rubi
▴ 110
0
votes
4
replies
1.4k
views
snapCGH fails in runBioHMM
aCGH
Microarray
TwoChannel
Cancer
limma
aCGH
snapCGH
aCGH
Microarray
TwoChannel
Cancer
updated 14.9 years ago by
Wolfgang Raffelsberger
▴ 160 • written 14.9 years ago by
Ramon Diaz
★ 1.1k
1
vote
2
replies
2.1k
views
summarization for G4110B two colors agilent array: how to?
marray
agilent
twochannel
normalization
limma
updated 9.2 years ago by
Gordon Smyth
50k • written 9.2 years ago by
Andrea Grilli
▴ 240
0
votes
2
replies
3.4k
views
failure in GDS2eSet() in package GEOquery
Microarray
OneChannel
TwoChannel
DataImport
bridge
GEOquery
Microarray
OneChannel
bridge
updated 16.4 years ago by
Sean Davis
21k • written 16.4 years ago by
Wittner, Ben
▴ 290
3
votes
1
reply
2.9k
views
WGCNA: single channel microarray, one categorical covariate, how to apply it?
wgcna
twochannel
onechannel
updated 9.4 years ago by
Peter Langfelder
★ 2.9k • written 9.4 years ago by
jeiroje
▴ 20
0
votes
1
reply
1.3k
views
Downloading Twochannel microarray data from ArrayExpress
arrayexpress
twochannel
microarray
6.4 years ago
Andy91
▴ 60
0
votes
1
reply
1.2k
views
read.maimages problem under sun ?
Microarray
OneChannel
TwoChannel
DifferentialExpression
Preprocessing
QualityControl
affy
16.9 years ago
Amin Moghaddasi
▴ 130
9 results • Page
1 of 1
Recent ...
Replies
Comment: miRTarRnaseq library
by
mercedeh.movassagh
▴ 10
Yes that is correct
Comment: What benchmark should I use for setting the EdgeR filterByExpr min.count paramet
by
Gordon Smyth
50k
It is the minimum group size rather than the total number of samples that is relevant. `min.prop` is more a biological parameter rather th…
Answer: Microarray Limma Model fitting and DEG
by
Gordon Smyth
50k
This dataset seems straightforward to analyse using the original MAS expression values on GEO. MAS expression values are known to be noisy …
Answer: Trimming a section of a scaffold from a genome
by
James W. MacDonald
65k
It's undoubtedly possible, but you don't provide enough information to go on. If I assume you are talking about an existing `BSgenome` pack…
Comment: DEG Filtering
by
Gordon Smyth
50k
I already know that you using CEL files because you need them to perform RMA normalization. Yes, you should follow the advice I have alread…
Votes
DESeq2 normalization vs VST vs rlog
Answer: DESeq2 "Contrast" option
Answer: error in ChAMP loading file
Circumvent creating .ff files in the working directory when using genotype.Illumina() function
Answer: Problem with maplot {affy} method when using rma {affy} method output as its inp
Awards
• All
Popular Question
to
Pierre Lindenbaum
▴ 10
Popular Question
to
Gordon Smyth
50k
Popular Question
to
Jenny Drnevich
★ 2.0k
Popular Question
to
Robert Castelo
★ 3.1k
Teacher
to
Peter Langfelder
★ 2.9k
Locations
• All
France,
7 minutes ago
Switzerland,
20 minutes ago
United States,
33 minutes ago
Spain,
41 minutes ago
United States,
48 minutes ago
Traffic: 734 users visited in the last hour
Content
Search
Users
Tags
Badges
Help
About
FAQ
Access
RSS
API
Stats
Use of this site constitutes acceptance of our
User Agreement and Privacy Policy
.
Powered by the
version 2.3.6