9 months ago
Ndimensional
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2
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641
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Matteo
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written 10 months ago by
barrypraveen
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3
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1.2k
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17 months ago • updated 16 months ago
mohammedtoufiq91
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3
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908
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18 months ago • updated 17 months ago
duhwa.lee
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4
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1.1k
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22 months ago
uhlkatie
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2
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3
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947
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updated 2.2 years ago by
Michael Love
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Luisa
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3
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910
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updated 2.8 years ago by
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written 2.8 years ago by
Alexander
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838
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updated 2.9 years ago by
Michael Love
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written 2.9 years ago by
pthom010
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7
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1.7k
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3.2 years ago
agoesmartini
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913
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updated 3.4 years ago by
Kevin Blighe
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3.9k
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written 3.4 years ago by
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updated 5.5 years ago by
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written 5.5 years ago by
Stanley Yang
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updated 5.8 years ago by
Michael Love
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written 5.8 years ago by
mmokrejs
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updated 5.9 years ago by
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written 5.9 years ago by
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updated 6.2 years ago by
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written 7.8 years ago by
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7.1 years ago
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updated 3.3 years ago by
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written 7.1 years ago by
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updated 7.2 years ago by
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written 7.2 years ago by
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updated 7.8 years ago by
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written 7.8 years ago by
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Recent ...
Replies
Answer: DESEQ2 IHW and Apelgm method for Shrinkage (adding s values to FDR)
by
Michael Love
41k
> I got many p values that had "1.000000e+00" and padj "1" and stat of "0" when I added the Log threshold of LFC >1 and LFC < -1...is this …
Comment: Trying to use enrichGO
by
fernanda.backsouza
▴
10
With all my love, thank you Guido, GOxploreR beeing a big ally for me.
I don't know how to be grateful right now.
Comment: DESeq2 output used for PCA plot on R studio
by
swbarnes2
★
1.3k
You didn't generate it with an experiment, you made it up:
Your PCA doesn't look like a good RNASeq experiment, because it's not.
Answer: Opposite sign of LFC in count plots of DEGs (DESeq2)
by
swbarnes2
★
1.3k
Your contrast is comparing LGR5 to Homeostasis. The bottom 2 are fine, it's the top one that is wrong.
Are you sure this step isn't misla…
Comment: get BM error
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65k
I believe you need NCBI Gene IDs for KEGG, in which case you may need to map. The three genes you have shown here don't map, and of those t…
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