9.3 years ago • updated 9.2 years ago
Robert Castelo
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updated 7.5 years ago by
James W. MacDonald
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written 7.5 years ago by
tangming2005
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updated 7.5 years ago by
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written 7.5 years ago by
Lna
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updated 7.8 years ago by
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written 7.8 years ago by
Asma rabe
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updated 6.5 years ago by
Hervé Pagès
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written 6.5 years ago by
tangming2005
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updated 6.6 years ago by
jma1991
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written 6.6 years ago by
tangming2005
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updated 6.5 years ago by
James W. MacDonald
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written 6.5 years ago by
izzy.yichao.cai
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updated 7.4 years ago by
Hervé Pagès
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written 7.4 years ago by
wcstcyx
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updated 6.8 years ago by
Valerie Obenchain
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written 6.9 years ago by
Lna
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updated 5.4 years ago by
James W. MacDonald
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written 5.4 years ago by
olavur
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updated 6.8 years ago by
Valerie Obenchain
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written 6.8 years ago by
Lna
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updated 7.7 years ago by
Martin Morgan
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written 7.7 years ago by
li lilingdu
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updated 6.1 years ago by
James W. MacDonald
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written 6.1 years ago by
shinhengchiou
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updated 6.6 years ago by
James W. MacDonald
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written 6.6 years ago by
l.selfors
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8.0 years ago
ribioinfo
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Recent ...
Replies
Comment: Batch/method effect correction on a cohort of patients with RUVseq and DESeq2
by
Alexandre
•
0
Hello James,
Thank you for your answer and precise exemple ! It is disappointing but makes sense.
Best,
Alexandre
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James W. MacDonald
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Yes. The `keys` argument to both `select` and `mapIds` will accept a vector (see `?select` for more information). Also, the [vignette][1] f…
Comment: How to retrieve gene ontology GO class from gene list?
by
bandconductor
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Thanks, this is potentially a much faster way than parsing BiomRt. However, it is only returning one GO term right now (biomaRt returns a f…
Comment: Batch/method effect correction on a cohort of patients with RUVseq and DESeq2
by
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Both `RUVseq` and `sva` are meant to be used to remove technical variability. The problem is the identification of variability that is tech…
Comment: Batch/method effect correction on a cohort of patients with RUVseq and DESeq2
by
Alexandre
•
0
Hello James,
Thank you very much for your answer and taking the time to read my post.
I understand your remark, but isn't the approach o…
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