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Answer: Batch/method effect correction on a cohort of patients with RUVseq and DESeq2
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You cannot correct for technical variability due to batch if samples are nested in batch. The technical and biological differences are comp…
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You will need to show some reproducible code for anybody to track this down. Please note that `DESeq2` has been used by thousands of people…
Comment: Batch/method effect correction on a cohort of patients with RUVseq and DESeq2
by
Alexandre
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My code for the sessionInfo() . If the pictures are too big, I will downsize them. THank you again for reading my post !
```r
> sessionInf…
Comment: Reproducibility issue with scran together with lapply and BiocParallel
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ATpoint
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Thanks Aaron for the response. RNGseed (for me) has no effect. I actually stumbled over this in one of my analysis where I have a constant …
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Thank you for your comment!
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