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universalmotif
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3
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2
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universalmotif, shuffle_sequences quits unexpectedly when running on HPC
universalmotif
2.2 years ago
alexandre.blais
▴ 50
2
votes
2
replies
793
views
universalmotif, question about enrich_motifs function and number of hits returned
universalmotif
scanning
enrich_motifs
PWM
2.2 years ago
alexandre.blais
▴ 50
3
votes
8
replies
1.4k
views
iupac2meme function missing in universalmotif package
universalmotif
updated 3.0 years ago by
snystrom
▴ 10 • written 3.1 years ago by
lessismore
▴ 20
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Comment: Differential peaks that were not identified in diffbind were identified in diseq
by
lonn
• 0
Thank you for your suggestions! Here is the MA plot: ![enter image description here][1] I tried several normalization methods with DiffBi…
Answer: OrgDb for maize
by
Guido Hooiveld
★ 3.9k
I notice the data you are working with is based on `ensembl` ids. This is important, because the `OrgDb` are annotation databases that are …
Comment: Theoretical WGCNA Question
by
Garrett
• 0
Thanks Peter!
Comment: FGSEA pre-ranked input in increasing order or decreasing
by
sropri
• 0
Thank you!
Comment: FGSEA pre-ranked input in increasing order or decreasing
by
alserg
▴ 240
They are reorder in the decreasing order.
Votes
Answer: OrgDb for maize
Comment: significant difference of p-values with dream() after updating VariancePartition
How to tell and visualize up/down regulation of pathways from clusterprofiler gsea output
Comment: DEXSeq DEXSeqDataSet count matrix duplication
Comment: Error in champ.load(): The following specified files do not exist
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