Bioconductor Update

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7.2k

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bioconductor biocupgrade upgrade update bioclite

8.4 years ago enricoferrero ▴ 660

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5.7k

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update bioclite

updated 10.0 years ago by Dan Tenenbaum ★ 8.2k • written 10.0 years ago by dianmante • 0

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900

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support.bioconductor.org update News

5.8 years ago shepherl 4.0k

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3.3k

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biocmanager valid update packages

updated 4.4 years ago by Kevin Blighe ★ 4.0k • written 4.4 years ago by bs14ab • 0

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1.7k

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experimentdata update

updated 10.0 years ago by Laurent Gatto 1.6k • written 10.0 years ago by paul.theodor.pyl ▴ 10

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6.7k

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deseq2 update

9.8 years ago zshao1 • 0

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2.3k

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biocLite update all default ask

updated 5.6 years ago by Fischer-philipp ▴ 30 • written 5.6 years ago by rgiannico ▴ 10

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2.1k

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installation update

updated 7.7 years ago by James W. MacDonald 67k • written 7.7 years ago by debg • 0

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1.3k

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PANTHER.db update annotation go

updated 5.7 years ago by Martin Morgan 25k • written 5.7 years ago by alfonsosaera • 0

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654

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Versions Update BindingSiteFinder

updated 21 months ago by Mike Smith ★ 6.5k • written 21 months ago by M.Klostermann • 0

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793

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update new release version

5.1 years ago zzrickli • 0

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1.5k

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software error packages update

updated 4.2 years ago by James W. MacDonald 67k • written 4.2 years ago by bs14ab • 0

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1.5k

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update Omixer maintainer

updated 3.8 years ago by shepherl 4.0k • written 3.8 years ago by l.j.sinke • 0

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974

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bioclite package installation update

7.6 years ago Malcolm Cook ★ 1.6k

14 results • Page 1 of 1

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Comment: pathview error "negative length vectors are not allowed by Evan • 0

Same for N-glycan metabolism-- fails with `same.layer = TRUE` , smudges and comet-like shading with `same.layer = FALSE`, crowded web with …

Comment: How to conduct maSigPro analysis with only one condition? by James W. MacDonald 67k

Technically it's fitting an analysis of deviance (ANODEV) test, but the principle is the same - deviance, like the likelihood, measures goo…

Comment: How to conduct maSigPro analysis with only one condition? by James W. MacDonald 67k

Yeah, it's fine. What `maSigPro` does in this case is to reformulate the data. Your design has columns that are not useful, and `maSigPro` …

Answer: Unable to install any Bioconductor package with new R 4.4.1 - path nor writable by James W. MacDonald 67k

You have installed the packages you wanted: ``` package BiocVersion successfully unpacked and MD5 sums checked package LEA success…

Comment: QSEA- Extraction of Normalized methylation across the samples by celiaruby127 • 0

If you need specific counts for defined regions or windows, you may want to explore other functions or slots within the QSEA object that co…

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Comment: Spectra and PSMatch- trouble in reducePSMs, joinSpectraData, or countIdentificat

Answer: How to conduct maSigPro analysis with only one condition?

Answer: Removing Effect of Covariate in Only a Subset of Samples in a Model Containing A

Answer: Importing data into the DESeq2 pipeline using tximport

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