Bioconductor Vignette

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SummarizedExperiment vignette

2.6 years ago BioInfoBeginnerrr • 0

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biomaRt vignette

updated 3.5 years ago by ashleymaeconard ▴ 10 • written 4.9 years ago by Russ Hyde ▴ 10

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newpackage vignette installation

updated 5.0 years ago by shepherl 4.0k • written 5.0 years ago by Krutik Patel ▴ 10

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flowcore vignette software error

updated 7.0 years ago by Jiang, Mike ★ 1.3k • written 7.1 years ago by Robert Baer ▴ 70

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biocstyle vignette

updated 7.2 years ago by Andrzej Oleś ▴ 750 • written 7.2 years ago by Aaron Lun ★ 28k

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STRINGdb vignette

updated 7.4 years ago by Gregor Rot ▴ 10 • written 7.4 years ago by mwinerip • 0

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software error cellmix vignette expressionset

7.7 years ago gabor.halasz • 0

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ggbio autoplot color vignette

updated 8.7 years ago by aaron ▴ 10 • written 8.7 years ago by timothypyork • 0

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github vignette test developers

updated 8.8 years ago by Dan Tenenbaum ★ 8.2k • written 8.8 years ago by anthonycolombo60 • 0

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vignette

updated 9.2 years ago by Dan Tenenbaum ★ 8.2k • written 9.2 years ago by KB ▴ 50

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Comment: ChAMP - obtaining beta values using EPICv2 annotation by Aurora • 0

Have you solved it? I have the same problem as you

Comment: Unable to install any Bioconductor package with new R 4.4.1 - path nor writable by gabry.scata ▴ 10

Hi James, and thank you so much for your quick reply! That's great to know that I have installed successfully the packages i wanted. What …

Comment: pathview error "negative length vectors are not allowed by Evan • 0

Same for N-glycan metabolism-- fails with `same.layer = TRUE` , smudges and comet-like shading with `same.layer = FALSE`, crowded web with …

Comment: How to conduct maSigPro analysis with only one condition? by James W. MacDonald 67k

Technically it's fitting an analysis of deviance (ANODEV) test, but the principle is the same - deviance, like the likelihood, measures goo…

Comment: How to conduct maSigPro analysis with only one condition? by James W. MacDonald 67k

Yeah, it's fine. What `maSigPro` does in this case is to reformulate the data. Your design has columns that are not useful, and `maSigPro` …

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Removing Effect of Covariate in Only a Subset of Samples in a Model Containing All Samples Loses Full Rank if Factor but not Numerical

Comment: How to conduct maSigPro analysis with only one condition?

Comment: Spectra and PSMatch- trouble in reducePSMs, joinSpectraData, or countIdentificat

Answer: How to conduct maSigPro analysis with only one condition?

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