Bioconductor Volcano

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plot volcano volcanoplot

updated 14 months ago by Basti ▴ 750 • written 14 months ago by Sooni ▴ 10

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DESeq2 adjp Volcano LRT

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DESeq2 volcano

updated 18 months ago by Michael Love 41k • written 19 months ago by nico • 0

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Answer: Memory errors using read.bismark? by Peter Hickey ▴ 690

Thanks for sharing an example file. This is a very large non-CpG methylation dataset, which are tricky to work with for a number of reason…

Comment: Reading huge bismark coverage files using bbseq::read.bismark by Peter Hickey ▴ 690

Superficially, your issue is similar to [https://github.com/hansenlab/bsseq/issues/136](https://github.com/hansenlab/bsseq/issues/136). You…

Answer: Reading huge bismark coverage files using bbseq::read.bismark by Peter Hickey ▴ 690

I'm one of the **bsseq** developers. Are you able to share one of your files with me (e.g., via Dropbox, Google Drive, OneDrive, etc.). Tha…

Comment: ComplexHeatmap: add pch to rowAnnotation when the input is a data frame with var by daniel.carbajo • 0

Yeah I think this is the way to go! How can I pass `col_list` here though? `Heatmap` does not accept a list of color vectors... How can I m…

Answer: The issue with SGSeq_analyzeFeatures() returns errors on BAM files by kamryncole1963 • 0

https://support.bioconductor.org/p/85837/[tunnel rush][1] Refer to this link, it may help. [1]: https://tunnelrush3.com

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