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warnings
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2
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12
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2.3k
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Synapter - makeMaster() and synergise() functions warnings/fails
software error
warnings
synapter
9.4 years ago
sogueta
• 0
4
votes
6
replies
2.0k
views
Can I ignore the warnings in limma show " Coefficients not estimable" after batch correct ?
limma
batchcorrect
warnings
updated 5.1 years ago by
Aaron Lun
★ 28k • written 5.1 years ago by
xingxd16
▴ 20
0
votes
2
replies
1.6k
views
DESeq2 doubts about transformations + nbinomWaldtest warning
rna-seq
deseq2
warnings
nbinomWaldTest
transformation
updated 3.8 years ago by
Michael Love
41k • written 3.8 years ago by
andreia
▴ 10
1
vote
3
replies
1.6k
views
DEXSeq warnings for millions of reads
DEXSeq
warnings
dexseq_count
updated 8.0 years ago by
Darya Vanichkina
▴ 120 • written 8.0 years ago by
Assa Yeroslaviz
★ 1.5k
0
votes
1
reply
1.5k
views
R CMD check S3 generic/method consistency WARNING
cmd check
warnings
s3
updated 7.7 years ago by
Gordon Smyth
50k • written 7.7 years ago by
anthonycolombo60
• 0
1
vote
2
replies
1.3k
views
Mysterious warning message: "...in .local... ignoring 'pos' argument
warnings
gostats
updated 9.0 years ago by
James W. MacDonald
65k • written 9.0 years ago by
jon.young
• 0
6 results • Page
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Comment: Light difference when using coef vs omit a group when compare 3 groups.
by
Chris
• 0
Hi Gordon, thank you so much for further guidance! I discussed this issue with doctor know about Alzheimer and they don't expect significan…
Comment: Single-Cell Data Simulation from Bulk RNA-seq
by
wichaidi
• 0
Hi - I am wondering what you decided to do. I am currently in a similar condition where I need to create a toy scRNAseq data from bulk.
Comment: Methylation Analysis experiment design using Limma
by
hortense96
• 0
Hi, Thank you very much for your answer. It's true that I only used 6 samples for this analysis, which is consistent with your explanation…
Comment: Error using champ.import
by
shilpa
• 0
I'm having same issues too. Did anyone manage to resolve it?
Answer: Methylation Analysis experiment design using Limma
by
Gordon Smyth
50k
You don't explain how many samples you have (columns of data), but the warning message shown in your post would arise if there are in fact …
Votes
Answer: How many of my genes from my gene list are in each KEGG pathway?
Comment: Light difference when using coef vs omit a group when compare 3 groups.
DESeq2 variance transformation error and plot dispersion Estimate
A: DESeq2 variance transformation error and plot dispersion Estimate
ensembl to hgnc symbols creates duplicates
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