Showing : widgettools • reset
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Can't install tcl/tk on Mac OS 10.3.7
widgetTools widgetTools
updated 19.3 years ago by ▴ 430 • written 19.3 years ago by ▴ 10
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8
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2.0k
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widgetTools
affy widgetTools affy widgetTools
updated 21.1 years ago by ▴ 40 • written 21.1 years ago by ▴ 90
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12
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1.9k
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Some Genefilter questions
GO Survival cdf genefilter geneplotter tkWidgets affy affydata widgetTools gcrma affyPLM
updated 17.4 years ago by ★ 5.5k • written 17.4 years ago by ▴ 460
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10
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Some Genefilter questions
Normalization Survival Cancer cdf genefilter geneplotter affy affydata widgetTools gcrma
updated 17.4 years ago by ▴ 460 • written 17.4 years ago by ▴ 70
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9
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1.9k
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Getting LimmaGUI to run
tkWidgets widgetTools limmaGUI widgetInvoke tkWidgets widgetTools limmaGUI widgetInvoke
18.8 years ago chris umbricht ▴ 110
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1.3k
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Error loading tcltk for tkWidgets and widgetTools on duo Intel Mac under OS X
Cancer tkWidgets widgetTools Cancer tkWidgets widgetTools
updated 17.6 years ago by ▴ 150 • written 17.6 years ago by ★ 2.9k
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6
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1.3k
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install Monograph problem
Cancer widgetTools Cancer widgetTools
17.0 years ago Seth Falcon ★ 7.4k
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3
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1.3k
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widgetTools wFuns problem
DynDoc tkWidgets reposTools widgetTools DynDoc tkWidgets reposTools widgetTools
updated 18.2 years ago by ★ 2.9k • written 18.2 years ago by ▴ 80
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2
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1.3k
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ReadAffy widget fails for Annotated DataFrame
Microarray DynDoc tkWidgets affy widgetTools Microarray DynDoc tkWidgets affy widgetTools
updated 16.6 years ago by 25k • written 16.6 years ago by ▴ 140
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4
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1.2k
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Enabling the widget option
tkWidgets affy widgetTools tkWidgets affy widgetTools
21.3 years ago Tapan Mehta ▴ 270
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3
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1.2k
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Recent changes to Bioconductor packages
reposTools graph widgetTools limma reposTools graph widgetTools limma
20.6 years ago • updated 20.5 years ago madman@jimmy.harvard.edu ▴ 850
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1
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1.2k
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tcl/tk and biocLite
Genetics Cancer tkWidgets widgetTools marray Genetics Cancer tkWidgets widgetTools marray
updated 17.0 years ago by ★ 7.4k • written 17.0 years ago by ▴ 30
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Tcl install
genefilter widgetTools genefilter widgetTools
19.5 years ago Matt McCall ▴ 50
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1
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1.1k
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paired design, LIMMA
cdf tkWidgets affy widgetTools limma affyio cdf tkWidgets affy widgetTools limma affyio
updated 17.0 years ago by ▴ 470 • written 17.0 years ago by 50k
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marray and limma error with lmFit
Microarray Biobase DynDoc widgetTools limma arrayQuality marray convert Microarray DynDoc
17.0 years ago Paquet, Agnes ▴ 500
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Re: Annotate clones Bioconductor beginner
Microarray Annotation GUI annotate widgetTools AnnBuilder Microarray Annotation GUI
20.4 years ago John Zhang ★ 2.9k
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1.0k
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batch vs interactive behavior of reposTools()
Biobase DynDoc tkWidgets widgetTools Biobase DynDoc tkWidgets widgetTools
19.4 years ago Marion Hakanson ▴ 50
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998
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Bioconductor web page
GO Cancer tkWidgets reposTools widgetTools simpleaffy affyQCReport affyio GO Cancer
16.9 years ago Seth Falcon ★ 7.4k
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problems reading Illumina files using BeadExplorer
affy widgetTools limma marray convert affyio BeadExplorer affy widgetTools limma marray
17.5 years ago Vitalina Komashko ▴ 10
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2
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Problems Getting Started
cdf widgetTools cdf widgetTools
updated 21.1 years ago by ★ 1.1k • written 21.1 years ago by ▴ 340
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955
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Memory issues with limma and ImaGen file import
widgetTools limma widgetTools limma
17.3 years ago CV Markus ▴ 10
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1
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906
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ReadAffy question
GO Ruuid DynDoc annotate genefilter multtest tkWidgets reposTools affy widgetTools limma
updated 18.3 years ago by 65k • written 18.3 years ago by ▴ 890
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0
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902
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tcl/tk dependency of biocLite
Genetics Cancer tkWidgets widgetTools marray Genetics Cancer tkWidgets widgetTools marray
17.0 years ago grischa tödt ▴ 30
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1
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864
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ReadAffy error
widgetTools widgetTools
updated 20.8 years ago by ★ 2.3k • written 20.8 years ago by ★ 1.4k
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1
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844
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Installation failed
reposTools widgetTools reposTools widgetTools
updated 21.2 years ago by ★ 3.9k • written 21.2 years ago by ▴ 30
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0
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832
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update.packages
widgetTools widgetTools
20.8 years ago Justin Borevitz ▴ 90
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0
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809
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error running the example of the widget function in the widgetTools library
widgetTools widgetTools
18.0 years ago Hervé Pagès 16k
0
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0
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773
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Error loading tcltk for tkWidgets and widgetTools on duo Intel Mac under OS X
widgetTools widgetTools
17.6 years ago John E. Cornell, Ph.D. ▴ 150
0
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1
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721
views
error running the example of the widget function in the widgetTools library
widgetTools widgetTools
updated 18.0 years ago by ★ 7.4k • written 18.0 years ago by ▴ 80
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0
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693
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Error in loading bioconductor packages in Rterm and ESS+XEmacs modes
GUI widgetTools GUI widgetTools
21.0 years ago Dr Mushtaq Ahmed ▴ 20
30 results • Page 1 of 1
Recent ...
Replies
Comment: Batch/method effect correction on a cohort of patients with RUVseq and DESeq2 by Alexandre • 0
Hello James, Thank you for your answer and precise exemple ! It is disappointing but makes sense. Best, Alexandre
Comment: How to retrieve gene ontology GO class from gene list? by James W. MacDonald 65k
Yes. The `keys` argument to both `select` and `mapIds` will accept a vector (see `?select` for more information). Also, the [vignette][1] f…
Comment: How to retrieve gene ontology GO class from gene list? by bandconductor • 0
Thanks, this is potentially a much faster way than parsing BiomRt. However, it is only returning one GO term right now (biomaRt returns a f…
Comment: Batch/method effect correction on a cohort of patients with RUVseq and DESeq2 by James W. MacDonald 65k
Both `RUVseq` and `sva` are meant to be used to remove technical variability. The problem is the identification of variability that is tech…
Comment: Batch/method effect correction on a cohort of patients with RUVseq and DESeq2 by Alexandre • 0
Hello James, Thank you very much for your answer and taking the time to read my post. I understand your remark, but isn't the approach o…
Votes
Answer: Batch/method effect correction on a cohort of patients with RUVseq and DESeq2
Answer: Batch/method effect correction on a cohort of patients with RUVseq and DESeq2
Answer: Use of negative binomial model for exponential decay rate estimation using DESeq
C: null model and DEXSeqDataSet object in DEXSEQ
A: Are published RNA seq data analyses often wrong in calculating p-values and FDR?
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