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windows
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2
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1.9k
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R/Rstudio: using rtracklayer to import bigwig files from http works with MacOS but not with Windows
import.bw
rtracklayer
Windows
http
2.4 years ago
sla
• 0
1
vote
3
replies
1.4k
views
unable to install DESeq2 there is no package called XML
deseq2
bioconductor
windows
xml
installation
updated 3.7 years ago by
Michael Love
41k • written 3.7 years ago by
sarah3
• 0
0
votes
1
reply
577
views
function plotgenomicregions does not appear in the aspli package installed in windows
software error
aspli
plotgenomicregions
windows
4.0 years ago
joanmarquez21
• 0
0
votes
5
replies
1.7k
views
rtracklayer::import() BigWig issue on windows (solved)
software error
BigWig
import
windows
4.1 years ago • updated 4.0 years ago
lsilva.m
• 0
2
votes
4
replies
3.6k
views
Error in windows() function
software error
R
windows
updated 5.5 years ago by
Mike Smith
★ 6.5k • written 5.5 years ago by
a
• 0
0
votes
5
replies
1.5k
views
HiTC importC not working
HiTC
IRanges
windows
debian
updated 6.1 years ago by
Nicolas Servant
▴ 260 • written 6.1 years ago by
René Wiegandt
• 0
0
votes
3
replies
1.0k
views
pthread problem with tokay2 window platform
pthread
windows
tokay2
updated 6.3 years ago by
Aaron Lun
★ 28k • written 6.3 years ago by
jiaxing.lin
• 0
0
votes
1
reply
1.3k
views
rhdf5 h5ls output differs from Linux to Windows
R
h5ls
windows
linux
updated 6.4 years ago by
Mike Smith
★ 6.5k • written 6.5 years ago by
maxime.fortin
• 0
0
votes
14
replies
2.2k
views
Path to file in windows
bioconductor
R
windows
diffbind
updated 7.0 years ago by
Gord Brown
▴ 650 • written 7.0 years ago by
jorrenkuster
• 0
1
vote
1
reply
1.0k
views
Building VariantAnnotation on Windows - Makevars.win error
windows
variantannotation
makevars.win
updated 8.0 years ago by
Martin Morgan
25k • written 8.0 years ago by
simon
▴ 10
0
votes
2
replies
1.3k
views
rhdf5 installation issue on Windows 64bit
rhdf5
windows
8.5 years ago
cyang227
• 0
0
votes
3
replies
2.4k
views
DLL maps not found while compiling package in Windows machine
package
compilation error
dll
windows
8.6 years ago • updated 8.5 years ago
Miguel Juliá
• 0
8
votes
7
replies
1.8k
views
RMySQL availiability with Bioconductor 3.0
Install
RMySQL
Windows
updated 9.6 years ago by
Martin Morgan
25k • written 9.6 years ago by
Panagiotis Moulos
▴ 30
13 results • Page
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Comment: FilterByExpr low counts with small sample size
by
Gordon Smyth
50k
As always, it helps to see code. Are you running `voom` or `voomLmFit`? Did you run `normLibSizes()` in edgeR prior to `voom`? Are you star…
Comment: Batch correction and repeated measures
by
Gordon Smyth
50k
In your code, it was clear that `expr.mat` was a matrix rather than a DGEList, so it has to be a count matrix. If you have a DGEList object…
Comment: Methylation Analysis experiment design using Limma
by
Gordon Smyth
50k
I don't analyse methylation arrays so cannot advise on specific limma settings for that type of data. Please follow the advice of the methy…
Comment: Light difference when using coef vs omit a group when compare 3 groups.
by
Chris
• 0
Hi Gordon, thank you so much for further guidance! I discussed this issue with psychology doctor who treat Alzheimer patients and they don'…
Comment: Single-Cell Data Simulation from Bulk RNA-seq
by
wichaidi
• 0
Hi - I am wondering what you decided to do. I am currently in a similar condition where I need to create a toy scRNAseq data from bulk.
Votes
Answer: How many of my genes from my gene list are in each KEGG pathway?
Comment: Light difference when using coef vs omit a group when compare 3 groups.
DESeq2 variance transformation error and plot dispersion Estimate
A: DESeq2 variance transformation error and plot dispersion Estimate
ensembl to hgnc symbols creates duplicates
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