Showing : workflows • reset
2
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5
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1.3k
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Workflow highthroughputassays can't install properly
workflows flowcore flowstats flowworkspace
5.3 years ago kristoffer.haurum • 0
2
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5
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2.2k
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Programs used in RNA-seq workflow
deseq2 bioconductor workflows differential gene expression rnaseqgene
6.2 years ago • updated 6.1 years ago cirisarri95 • 0
3
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7
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1.8k
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Workflows in BioC 3.2
workflows installation biocinstaller
updated 6.4 years ago by • 0 • written 6.6 years ago by ▴ 890
1
vote
4
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830
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Does BiocWorkflowTools package generate F1000Reseach/Bioconductor-stype PDF at once?
workflows biocworkflowtools bioconductor
4.0 years ago Koki ▴ 10
1
vote
2
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1.3k
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Installing workflows with bioconductor v3.0
software error workflows
updated 7.5 years ago by ★ 8.2k • written 7.5 years ago by • 0
0
votes
2
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849
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Problem with Annotating Genomic Variant
workflows vcf
6.9 years ago merella.stefania • 0
5
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1
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2.6k
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News: Bioconductor-related papers -- special F1000Research collection for Bioc2016
publication workflows benchmark teaching News
updated 6.1 years ago by ▴ 10 • written 6.2 years ago by 13k
0
votes
4
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1.2k
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workflow.R in BioC 3.3
workflows rnaseqgene
updated 6.0 years ago by • 0 • written 6.0 years ago by • 0
1
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2
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1.8k
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Tutorial for RNA-Seq Data Analysis
rnaseq data analysis tutorial workflows differential gene expression
updated 5.1 years ago by ★ 27k • written 5.1 years ago by • 0
3
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2
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2.1k
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Sparse matrices in Bioconductor objects for single-cell analyses
scater simpleSingleCell workflows
updated 4.9 years ago by ★ 27k • written 4.9 years ago by ▴ 70
0
votes
1
reply
460
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Unusual graph for Identifying HVGs from the normalized log-expression
workflows simplesinglecell
updated 3.7 years ago by ★ 27k • written 3.7 years ago by • 0
0
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1
reply
1.6k
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workflowInstall is not working
workflowinstall workflows
4.5 years ago mckf11111 • 0
0
votes
1
reply
680
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Problem installing Bioc Workflows
rnaseq workflows bioconductor
6.0 years ago Hadi Gharibi • 0
6
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1
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3.0k
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Tutorial: Orchestrating a small, parallel, RNA-seq pre-processing workflow using R
rnaseq biocparallel workflows sra Tutorial
6.9 years ago Sean Davis 21k
0
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0
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591
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News: DEADLINE: All packages to pass R CMD build and R CMD check
release software experimentdata workflows News
4.1 years ago shepherl 3.1k
0
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0
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1.1k
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Job: Services/Outreach orientend bioinformatics positions at EMBL - Heidelberg
EMBL services workflows training Job
7.2 years ago Wolfgang Huber 13k
3
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0
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1.6k
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News: BMC Source Code for Biology and Medicine: R/Bioconductor Workflows Section is calling for papers
workflows publish News
6.7 years ago Levi Waldron 1.1k
0
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0
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537
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News: Workflows now building on Bioc3.6
workflows News
4.7 years ago shepherl 3.1k
0
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0
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1.6k
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Job: Computational biologist / Bioinformatician – High-throughput screening
rnai high-throughput screening workflows Job
6.9 years ago e.schmidt ▴ 10
0
votes
1
reply
842
views
help installing bioconductor workflows
workflows biocinstaller error
6.0 years ago rocknrollscience • 0
1
vote
2
replies
785
views
Workflows in BioC 3.3
workflows workflowinstall 3.3
6.0 years ago Axel Klenk ▴ 990
21 results • Page 1 of 1
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Comment: Can Differential Isoform expression analysis can be performed using DESeq2 packa by priyanka.m • 0
Thank you for the suggestions. I will try to compare my results and accordingly interpret the two.
Answer: [sva] Error in density.default(x, adjust = adj) : 'x' contains missing values by wahaha • 0
I found the reason, because some gene expression levels are 0 in all samples. you can add these code to check the data: >exp_mean <- appl…
Answer: DESeq2 how to specify contrast to test difference of differences by Nicole • 0
The comment from @mikelove about specifying numeric contrasts answered my question. This code is not standalone, but I will leave it here i…
Comment: DESeq2 how to specify contrast to test difference of differences by Nicole • 0
Thank you, @mikelove - that did it! The results make sense now. From my original post, could you clarify what the `group1w.sexfemale` contr…
Comment: Rsamtools is not available for (for R version 4.0.2) by olinares-perdomo • 0
I had the same problem (R 4.2.0) I used BiocManager::install("Rsamtools", force = TRUE) And it is working fine
Votes
Answer: DESeq2 how to specify contrast to test difference of differences
Comment: DESeq2 how to specify contrast to test difference of differences
Answer: Confused about the design matrix in edgeR: How to tell R to consider one level a
Answer: biomaRt error unable to fix: need help troubleshooting
Answer: edgeR : results from goana and kegga functions show opposite sig. p-value
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