Showing : workflows • reset
6
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Tutorial: Orchestrating a small, parallel, RNA-seq pre-processing workflow using R
rnaseq biocparallel workflows sra Tutorial
8.8 years ago Sean Davis 21k
5
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1
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3.3k
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News: Bioconductor-related papers -- special F1000Research collection for Bioc2016
publication workflows benchmark teaching News
updated 8.0 years ago by ▴ 10 • written 8.1 years ago by ★ 13k
3
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2
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3.1k
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Sparse matrices in Bioconductor objects for single-cell analyses
scater simpleSingleCell workflows
updated 6.8 years ago by ★ 28k • written 6.8 years ago by ▴ 70
3
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0
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2.2k
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News: BMC Source Code for Biology and Medicine: R/Bioconductor Workflows Section is calling for papers
workflows publish News
8.6 years ago Levi Waldron ★ 1.1k
3
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7
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2.5k
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Workflows in BioC 3.2
workflows installation biocinstaller
updated 8.2 years ago by • 0 • written 8.5 years ago by ▴ 950
2
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5
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2.1k
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Workflow highthroughputassays can't install properly
workflows flowcore flowstats flowworkspace
7.2 years ago kristoffer.haurum • 0
2
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5
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3.0k
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Programs used in RNA-seq workflow
deseq2 bioconductor workflows differential gene expression rnaseqgene
8.0 years ago cirisarri95 • 0
1
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2
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1.7k
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Installing workflows with bioconductor v3.0
software error workflows
updated 9.4 years ago by ★ 8.2k • written 9.4 years ago by • 0
1
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2
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1.3k
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Workflows in BioC 3.3
workflows workflowinstall 3.3
7.9 years ago Axel Klenk ★ 1.0k
1
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2
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2.7k
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Tutorial for RNA-Seq Data Analysis
rnaseq data analysis tutorial workflows differential gene expression
updated 7.0 years ago by ★ 28k • written 7.0 years ago by • 0
1
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4
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1.4k
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Does BiocWorkflowTools package generate F1000Reseach/Bioconductor-stype PDF at once?
workflows biocworkflowtools bioconductor
5.9 years ago Koki ▴ 10
0
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4
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1.8k
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workflow.R in BioC 3.3
workflows rnaseqgene
updated 7.9 years ago by • 0 • written 7.9 years ago by • 0
0
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1
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1.0k
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Problem installing Bioc Workflows
rnaseq workflows bioconductor
7.9 years ago Hadi Gharibi • 0
0
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2
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1.3k
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Problem with Annotating Genomic Variant
workflows vcf
8.8 years ago merella.stefania • 0
0
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1
reply
842
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Unusual graph for Identifying HVGs from the normalized log-expression
workflows simplesinglecell
updated 5.6 years ago by ★ 28k • written 5.6 years ago by • 0
0
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0
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1.6k
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Job: Services/Outreach orientend bioinformatics positions at EMBL - Heidelberg
EMBL services workflows training Job
9.1 years ago Wolfgang Huber ★ 13k
0
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0
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833
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News: Workflows now building on Bioc3.6
workflows News
6.6 years ago shepherl 3.8k
0
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1
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2.6k
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workflowInstall is not working
workflowinstall workflows
6.4 years ago mckf11111 • 0
0
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0
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2.0k
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Job: Computational biologist / Bioinformatician – High-throughput screening
rnai high-throughput screening workflows Job
8.8 years ago e.schmidt ▴ 10
0
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1
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1.2k
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help installing bioconductor workflows
workflows biocinstaller error
7.9 years ago rocknrollscience • 0
0
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0
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1.1k
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News: DEADLINE: All packages to pass R CMD build and R CMD check
release software experimentdata workflows News
6.0 years ago shepherl 3.8k
21 results • Page 1 of 1
Recent ...
Replies
Comment: geneList error in clusterprofiler by Ana • 0
Ahh thank you, that fixed it!
Answer: geneList error in clusterprofiler by Basti ▴ 750
Have a look at the documentation : https://www.rdocumentation.org/packages/clusterProfiler/versions/3.0.4/topics/gseGO geneList argument s…
Comment: Memory errors using read.bismark? by Juan Higareda • 0
Thanks again for your answer, I will try to play a little bit with the parameters. Only one thing, my data are actually CpG methylation :)…
Comment: flowStats Search Error by tholmes • 0
Thank you so much!
Comment: what is the sampleFiles by James W. MacDonald 65k
I don't see any sampleFiles argument for any function in that package. Ideally you would at least tell us what function you are using.
Votes
Comment: Memory errors using read.bismark?
Comment: Not fully paired differential gene expression analysis
Comment: [DiffBind] Obtaining normalization factors
Answer: ComplexHeatmap: add pch to rowAnnotation when the input is a data frame with var
Comment: Not fully paired differential gene expression analysis
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