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Comment: Combine GRanges(List) to a single GRanges with unified breakpoints by Rodrigo • 0

Hi @malcolm-cook-6293 , Thanks again for the help. The code got me started albeit, I changed a bit the handling of the metadata. ``` #'…

Comment: how to get the gene set from online GO database by pengmin.wang.1 • 0

thank you for your information. But I can't run this: ```{r} hub <- AnnotationHub() ``` Error in UseMethod("filter_") : no applicable me…

Comment: RSEM - tximport; where is effective_length information used? Implications for sc by Kelen • 0

Perfect, thanks!

Comment: Confused about the CPM and TMM normalization in edgeR by Mohamed • 0

Thanks a lot.

Comment: Confused about the CPM and TMM normalization in edgeR by Mohamed • 0

Sorry for misunderstanding. What I meant was that there is always two option of using cpm on DGElist as shown in my above codes: Option 1:…

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Comment: Error while running DESeq2

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