Bioconductor Xvector

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bioconductor iranges s4vectors xvector r 3.3.2

updated 6.5 years ago by becker.gabriel ▴ 10 • written 6.5 years ago by chokoiboko • 0

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XVector docker Install

3.2 years ago RobKo ▴ 10

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IRanges GenomicRanges VariantTools XVector IRanges GenomicRanges VariantTools XVector

updated 11.2 years ago by Michael Lawrence ★ 11k • written 11.2 years ago by heyi xiao ▴ 360

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software error gcrma Xvector iranges

8.5 years ago • updated 8.4 years ago gary_smith • 0

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variantannotation xvector iranges

6.6 years ago Vivek.b ▴ 100

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XVector XVector

updated 11.5 years ago by Hervé Pagès 16k • written 11.5 years ago by Pengcheng Yang ▴ 60

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subseq Xvector dnastringset

updated 7.7 years ago by Hervé Pagès 16k • written 7.7 years ago by Sophie • 0

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S4Vectors IRanges XVector GenomicRanges scran

updated 6.0 years ago by Aaron Lun ★ 28k • written 6.0 years ago by Momo • 0

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Network Cancer IRanges XVector

10.4 years ago Hervé Pagès 16k

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Cancer XVector

10.4 years ago Hervé Pagès 16k

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858

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XVector

updated 3.9 years ago by Martin Morgan 25k • written 3.9 years ago by robmaz77 ▴ 20

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xvector

7.7 years ago Charles Plessy ▴ 180

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IRanges XVector AtomicList

written 2.6 years ago by Pierre-Luc Germain ▴ 20

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Comment: Problems with oarfish + tximport + swish by Michael Love 43k

Great thanks for posting the issue and sticking with it Annaleigh

Comment: Problems with oarfish + tximport + swish by brown.annaleigh • 0

Awesome possum! Update works!! Thank you so much for the help and guidance!

Comment: Postdoctoral Researcher in Spatial Gene Regulatory Networks underlying Stomatal by iqratechnology4 • 0

Iqra Technology is IT Solutions and Services Company. We are salesforce and Microsoft partner company. https://iqratechnology.com/

Comment: Differential expression of protein coding ENSGs (Ensembl IDs) | When to biomaRt? by James W. MacDonald 67k

> BTW, shouldn't you be using keep.lib.sizes = F and re-do the calcNormFactors() after filtering of the dglst low-expression ENSGs, as Gord…

Comment: Problems with oarfish + tximport + swish by Michael Love 43k

Let me see if I can add some code to tximeta to cover this case. I've added an argument `skipRanges` in devel branch which should allow: …

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Answer: Error in download.file for TCGAutils::symbolsToRanges

Answer: Differential expression of protein coding ENSGs (Ensembl IDs) | When to biomaRt?

Answer: Limma Interaction Effect with Covariates

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