Bioconductor Xvector

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XVector XVector

updated 11.5 years ago by Hervé Pagès 16k • written 11.5 years ago by Pengcheng Yang ▴ 60

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subseq Xvector dnastringset

updated 7.7 years ago by Hervé Pagès 16k • written 7.7 years ago by Sophie • 0

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XVector docker Install

3.2 years ago RobKo ▴ 10

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software error gcrma Xvector iranges

8.5 years ago • updated 8.4 years ago gary_smith • 0

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bioconductor iranges s4vectors xvector r 3.3.2

updated 6.5 years ago by becker.gabriel ▴ 10 • written 6.5 years ago by chokoiboko • 0

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S4Vectors IRanges XVector GenomicRanges scran

updated 6.0 years ago by Aaron Lun ★ 28k • written 6.0 years ago by Momo • 0

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IRanges GenomicRanges VariantTools XVector IRanges GenomicRanges VariantTools XVector

updated 11.2 years ago by Michael Lawrence ★ 11k • written 11.2 years ago by heyi xiao ▴ 360

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variantannotation xvector iranges

6.7 years ago • updated 6.6 years ago Vivek.b ▴ 100

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Cancer XVector

10.4 years ago Hervé Pagès 16k

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Network Cancer IRanges XVector

10.4 years ago Hervé Pagès 16k

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xvector

7.8 years ago Charles Plessy ▴ 180

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873

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IRanges XVector AtomicList

written 2.6 years ago by Pierre-Luc Germain ▴ 20

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860

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XVector

updated 3.9 years ago by Martin Morgan 25k • written 3.9 years ago by robmaz77 ▴ 20

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Comment: How to sort negative log2FC or FC in RNAseq for GSEA? by QN ▴ 10

Thank you ATpoint for your response! In the result of GSEA, like you indicated, there will be gene sets that have positive NES and gene se…

Comment: EdgeR Biological CVs by ATpoint ★ 4.6k

"Joseph" is a spam bot...

Comment: Problems with oarfish + tximport + swish by Im • 0

Office ta kemon

Answer: How to sort negative log2FC or FC in RNAseq for GSEA? by ATpoint ★ 4.6k

GSEA asks whether there are general shifts in gene expression towards certain terms. Hence, you would not split your results tables but ord…

Comment: EdgeR Biological CVs by James • 0

Thank you Gordon and Joseph. I presume question (1) would be answered by using a prior G0 of 0? For question (2), I was expecting a biolog…

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How to correct for tumor purity using DESeq2 to analyze TCGA tumor sample expression.