Showing : xvector • reset
5
votes
4
replies
6.0k
views
XVector installation fails because zlib.h is not found
XVector docker Install
4.2 years ago RobKo ▴ 10
2
votes
2
replies
2.9k
views
Error in installation of scran
S4Vectors IRanges XVector GenomicRanges scran
updated 7.0 years ago by ★ 29k • written 7.0 years ago by • 0
2
votes
1
reply
1.1k
views
is check=FALSE safe in compact()?
XVector
updated 4.9 years ago by 25k • written 4.9 years ago by ▴ 20
2
votes
5
replies
5.8k
views
How to use subSeq with DNAStringSet and information of GroupedIRanges?
subseq Xvector dnastringset
updated 8.7 years ago by 16k • written 8.7 years ago by • 0
1
vote
6
replies
5.6k
views
ERROR: compilation failed for package XVector
XVector XVector
updated 12.5 years ago by 16k • written 12.5 years ago by ▴ 60
0
votes
2
replies
1.7k
views
VariantAnnotation::locateVariants error coming from XVector
variantannotation xvector iranges
7.6 years ago Vivek.b ▴ 100
0
votes
15
replies
3.2k
views
Looking for the source for IRanges 2.8.1, S4Vectors 0.12.1 and XVector 0.14.0
bioconductor iranges s4vectors xvector r 3.3.2
updated 7.5 years ago by ▴ 10 • written 7.5 years ago by • 0
0
votes
3
replies
1.1k
views
Extracting values from out-of-bounds Rle Views
IRanges XVector AtomicList
written 3.6 years ago by ▴ 20
0
votes
0
replies
1.1k
views
Suggestion for a regression test in XVector
xvector
8.7 years ago Charles Plessy ▴ 180
0
votes
7
replies
2.8k
views
VariantTools installation problem: dependencies not available
IRanges GenomicRanges VariantTools XVector IRanges GenomicRanges VariantTools XVector
updated 12.2 years ago by ★ 11k • written 12.2 years ago by ▴ 360
0
votes
0
replies
1.7k
views
XVector
Cancer XVector
11.4 years ago Hervé Pagès 16k
0
votes
0
replies
1.4k
views
回复： XVector
Network Cancer IRanges XVector
11.4 years ago Hervé Pagès 16k
0
votes
5
replies
2.9k
views
Problem installing XVector package
software error gcrma Xvector iranges
9.5 years ago • updated 9.4 years ago gary_smith • 0
13 results • Page 1 of 1
Recent ...
Replies
Answer: When to use edgeR or limma by Gordon Smyth 53k
The short answer is that we generally prefer edgeR for applications with lots of small counts and limma for complex designs with random eff…
Comment: limpa-blank normalization and Spectronaut's PTM stoichiometry by Gordon Smyth 53k
I updated the above answer today.
Answer: When to use edgeR or limma by James W. MacDonald 68k
I would use edgeR's quasi-likelihood model for any analysis with a smaller number of observations (like 3 vs 3 or similar), but if you have…
Answer: limpa-blank normalization and Spectronaut's PTM stoichiometry by Gordon Smyth 53k
The short answer is that limpa reads standard feature-level intensities from Spectronaut or other quantifications tools. limpa is designed …
Comment: Question about the filterByExpr function inputs in edgeR by mohammedtoufiq91 ▴ 10
@gordonsmyth Noted, thank you very much.
Votes
Answer: When to use edgeR or limma
Answer: When to use edgeR or limma
Answer: When to use edgeR or limma
A: deseq2 - paired samples in 2 sequencing types with very different library sizes
Comment: Question about the filterByExpr function inputs in edgeR
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