User: helena_t

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helena_t0
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Posts by helena_t

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Answer: A: getIndices identifies non existing cells in a gate
... I downloaded the latest version of flowWorkspace (3.20.4), but unfortunately it didn't help. I just sent the FCS file and workspace that FlowWorkspace doesn't parse properly to the email address you indicated. Thank you for your help ...
written 2.6 years ago by helena_t0
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Answer: A: getIndices identifies non existing cells in a gate
... The problem is exactly the same with getData(): I have much more F5 cells than expected. I ran getPopStats and the flowCore counts are clearly very different from the flowJo counts. The flowJo gate that flowWorkspace doesn't manage to read properly is an ellipse. I tried replacing it by a polygon g ...
written 2.6 years ago by helena_t0
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getIndices identifies non existing cells in a gate
... Hi, I have issues with the getIndices() function from the flowWorkspace package. It identifies much more cells as "TRUE" for a gate than it should. Here's my code: wspath<-"~/Desktop/workspc.wsp" ws<-openWorkspace(wspath) G <- parseWorkspace(ws,name=1) nodelist<-getNodes(G[[1]]) ...
flowworkspace getindices written 2.6 years ago by helena_t0 • updated 2.6 years ago by Jiang, Mike1.2k
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Comment: C: Scaling fcs files with flowCore
... Thank you Mike, this function is working perfectly ! ...
written 3.4 years ago by helena_t0

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