User: Amitha Sampath
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Posts by Amitha Sampath
... Thanks Tom! I will try with the new version in that case :-) ...
... I am trying to use ChIPQC on a set of bam files only (without peaks). I am using the version ChIPQC 1.8.3. So, I created a sample sheet with the bam file and no peak file. I am currently facing 2 issues in generating a ChIPQCreport. 1. I am unable to generate a html report for the experiment (error ...
... Hi, I currently working with the package csaw to analyze differentially bound sites. Everything works fine until "estimateDisp". Please can someone help me identify the cause of the error. library(csaw) library(limma) library(edgeR) all <- list.files(pattern="^H3K27me3_.*.bam$") bam.files <- ...
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