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User: petervangalen

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Posts by petervangalen

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Comment: C: biomaRt no longer works with proxy after upgrade
... Thanks for the list. Using "www.ensembl.org" only gives the latest alignment, but you can access older alignments using archived depositories (example for mm9): mouse <- useMart("ENSEMBL_MART_ENSEMBL", dataset = "mmusculus_gene_ensembl", host = "may2012.archive.ensembl.org") They have a specia ...
written 2.8 years ago by petervangalen0
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Comment: C: Problem with biomart's listMarts function
... Thanks, this was very helpful. Using the host "ensembl.org" gives you the latest genomes, but you can access older versions using archives. In the first example, I retrieve information for mm9. In the second example, I use a special host for hg19. See also http://useast.ensembl.org/info/website/arch ...
written 2.8 years ago by petervangalen0

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