User: bpshiel

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bpshiel0
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Posts by bpshiel

<prev • 3 results • page 1 of 1 • next >
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challenging design matrix
... Hi all, Im using limma for differential expression. I've been struggling with the concept of my experimental design analysis for a few days so i need some help.   My groups are something like this... Feed condition survival feed1 wet 10 feed1 wet 4 ...
limma differential gene expression limma design matrix written 2.9 years ago by bpshiel0 • updated 2.9 years ago by Gordon Smyth37k
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Comment: C: EdgeR experimental design matrix
... Thanks alot, i thought about pooling my tank samples, but i was trying to avoid it. i'll give both a try.   ...
written 2.9 years ago by bpshiel0
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EdgeR experimental design matrix
... hi, i'm looking for some guidance on experimental design in EdgeR. The manual and examples i can find just dont cover what im looking for and im really stuck. My experimental design is set up like this.   Group Tank survival C 1 2 C 1 2 C ...
edger differential gene expression experimental design written 2.9 years ago by bpshiel0 • updated 2.9 years ago by Aaron Lun23k

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