User: Ir

gravatar for Ir
Ir0
Reputation:
0
Status:
New User
Location:
Last seen:
8 months, 1 week ago
Joined:
1 year, 2 months ago
Email:
i*******@gmail.com

Posts by Ir

<prev • 4 results • page 1 of 1 • next >
0
votes
2
answers
361
views
2
answers
Answer: A: How fold change is calculated in Ballgown?
... Just to clarify if I missed this info in the manual, so it means that this is a default  (WT/KO) and I can not control nominator and denominator ?   ...
written 8 months ago by Ir0
0
votes
1
answers
382
views
1
answers
Comment: C: HISAT-StringTie-Ballgown, order of biological replicates in script design
... Thank you so much, Alyssa!  ...
written 8 months ago by Ir0
0
votes
2
answers
361
views
2
answers
How fold change is calculated in Ballgown?
... Hi,  I would like to clarify how Ballgown computes the fold change (FC)? If "group" is defined as c('KO','WT'), what value goes to numerator, and what to denominator?  FC= KO/WT   or FC=WT/KO pData(bg) = data.frame(id=sampleNames(bg), group=rep(c('KO', 'WT') FC= ? Thank you! ...
ballgown written 8 months ago by Ir0
0
votes
1
answer
382
views
1
answer
HISAT-StringTie-Ballgown, order of biological replicates in script design
... Hello,  This is my first time I am using the Ballgown package. Although the tutorial and paper provide the great explanation and support, I am getting the results that we do not expect. Therefore,  I would like to clarify if my code is correct, as I can't find any mistake or incorrect value annotat ...
rna-seq ballgown written 8 months ago by Ir0 • updated 8 months ago by Alyssa Frazee110

Latest awards to Ir

No awards yet. Soon to come :-)

Help
Access

Use of this site constitutes acceptance of our User Agreement and Privacy Policy.
Powered by Biostar version 2.2.0
Traffic: 283 users visited in the last hour