User: yi.huang

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yi.huang30
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1 year, 2 months ago
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1 year, 4 months ago
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y*******@riken.jp

Posts by yi.huang

<prev • 5 results • page 1 of 1 • next >
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Comment: C: SVA: Error in svd((dats - rowMeans(dats))) : a dimension is zero
... Thanks! I fixed the problem! ...
written 15 months ago by yi.huang30
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SVA: Error in svd((dats - rowMeans(dats))) : a dimension is zero
... Hi all, When running svaseq as "batch_sup_sva = svaseq(dat0,mod1,mod0,controls=controls,n.sv=1)$sv", I got an error: Error in svd((dats - rowMeans(dats))) : a dimension is zero Does anyone know how this problem was happened? Many thanks, Yi   ...
sva written 15 months ago by yi.huang30 • updated 15 months ago by Jeff Leek490
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Comment: C: How to remove more than two batches in my data-sets
... Thank you so much! Sorry I didn't notice that there are some updates here.  ...
written 15 months ago by yi.huang30
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Comment: C: How to remove more than two batches in my data-sets
... Hi Gordon and Steve,  Thanks for your replies. Sorry for poor description of my question. What I mean is that there are more than two batch "factors". For example, how can I handle batch "factors" while the design is  ~ batch1+batch2+batch3+factor1+factor2? The removeBatchEffect is limited to "b ...
written 16 months ago by yi.huang30 • updated 16 months ago by Gordon Smyth32k
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How to remove more than two batches in my data-sets
... Hi all, I've used RemoveBatchEffect function from limma package for my previous datasets but it's limited to two batches only. I'm working with a data-sets that contains more than two batches. How can I do? Many thanks, Yi ...
rnaseq limma removebatcheffect() written 16 months ago by yi.huang30 • updated 16 months ago by Gordon Smyth32k

Latest awards to yi.huang

Student 16 months ago, asked a question with at least 3 up-votes. For How to remove more than two batches in my data-sets

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