User: yi.huang
yi.huang • 30
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Posts by yi.huang
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... Thanks! I fixed the problem!
...
written 2.9 years ago by
yi.huang • 30
2
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1
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1.1k
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... Hi all,
When running svaseq as "batch_sup_sva = svaseq(dat0,mod1,mod0,controls=controls,n.sv=1)$sv", I got an error:
Error in svd((dats - rowMeans(dats))) : a dimension is zero
Does anyone know how this problem was happened?
Many thanks,
Yi
...
0
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... Thank you so much! Sorry I didn't notice that there are some updates here.
...
written 2.9 years ago by
yi.huang • 30
0
votes
1
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834
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... Hi Gordon and Steve,
Thanks for your replies. Sorry for poor description of my question.
What I mean is that there are more than two batch "factors".
For example, how can I handle batch "factors" while the design is ~ batch1+batch2+batch3+factor1+factor2?
The removeBatchEffect is limited to "b ...
written 3.0 years ago by
yi.huang • 30
• updated
3.0 years ago by
Gordon Smyth ♦ 37k
11
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1
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834
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7 follow
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... Hi all,
I've used RemoveBatchEffect function from limma package for my previous datasets but it's limited to two batches only.
I'm working with a data-sets that contains more than two batches. How can I do?
Many thanks,
Yi
...
written 3.0 years ago by
yi.huang • 30
• updated
3.0 years ago by
Gordon Smyth ♦ 37k
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2.9 years ago,
created a question with more than 1,000 views.
For SVA: Error in svd((dats - rowMeans(dats))) : a dimension is zero
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3.0 years ago,
asked a question with at least 3 up-votes.
For How to remove more than two batches in my data-sets
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