User: emathe

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emathe0
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Posts by emathe

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Comment: C: Bioconductor SVN server error
... Thanks for the explanation. I have tried your suggestion but am still getting an error:   > install_github("ewymathe/testALTREinstall",repos=BiocInstaller::biocinstallRepos()) Downloading GitHub repo ewymathe/testALTREinstall@master from URL https://api.github.com/repos/ewymathe/testALTREinst ...
written 15 months ago by emathe0
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Comment: C: Bioconductor SVN server error
... I have tried setting options(pkgType="both") but to no avail.  As for org.Hs.eg.db, I have purposefully removed it from my machine to test this out.  Yes, the work-around you propose would work, but I do not want users to have to type many lines of code to install my package... Could you explain wh ...
written 15 months ago by emathe0
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Answer: A: Bioconductor SVN server error
... Thanks for your prompt suggestion.  Unforunately, I am still getting a similar error: > biocLite("mtmorgan/testALTREinstall") BioC_mirror: https://bioconductor.org Using Bioconductor 3.3 (BiocInstaller 1.22.3), R 3.3.1 (2016-06-21). Installing github package(s) ‘mtmorgan/testALTREinstall’ Downl ...
written 15 months ago by emathe0
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Comment: A: Bioconductor SVN server error
... Sorry, here is my sessionInfo(): > sessionInfo() R version 3.3.1 (2016-06-21) Platform: x86_64-apple-darwin13.4.0 (64-bit) Running under: OS X 10.10.5 (Yosemite) locale: [1] en_US.UTF-8/en_US.UTF-8/en_US.UTF-8/C/en_US.UTF-8/en_US.UTF-8 attached base packages: [1] stats     graphics  grDevices ...
written 15 months ago by emathe0
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Bioconductor SVN server error
... Hello, I'm trying to have my package install with all of its CRAN and BioC dependencies. In an attempt to do so, I've installed the latest github: > install_github("ewymathe/testALTREinstall") Downloading GitHub repo ewymathe/testALTREinstall@master from URL https://api.github.com/repos/ewymat ...
software error github written 15 months ago by emathe0

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