## User: oswaldo.lorenzo

Reputation:
10
Status:
New User
Location:
Last seen:
1 year, 10 months ago
Joined:
2 years, 11 months ago
Email:
o**************@gmail.com

#### Posts by oswaldo.lorenzo

<prev • 18 results • page 1 of 2 • next >
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... Dear Michael, I'll have a look at the plotRangesLinkedToData() to see if I can get what I'm trying to do. Anyway, what do you mean by using a more modular approach? Can I import the data in a different way that would make the plot easier to generate? Thank you very much for your help ...
written 2.6 years ago by oswaldo.lorenzo10
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... Hello, Basically, what I'm trying to do is to plot the linkage disequilibrium (LD) in a certain genomic region in a similar way as this website does: https://analysistools.nci.nih.gov/LDlink/?tab=ldmatrix. The problem is that the figure from this website has a low quality and I need the figure for ...
written 2.6 years ago by oswaldo.lorenzo10 • updated 2.6 years ago by Michael Lawrence11k
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... Thank you, That was my fault. I wasn't converting the bquote function into an expression in the right way. This will work for me like this. Best, Oswaldo ...
written 2.6 years ago by oswaldo.lorenzo10
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... Dear Michael Lawrence, This was my first guess, that turning the bquote(...)) into an expression(bquote(..)) object would work. The problem I get with this approach is that instead of getting the real gene name into the output plot title, I get the following character string: "bquote(Variation in ...
written 2.6 years ago by oswaldo.lorenzo10
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... Hello, The change Michael Lawrence made a few months ago on the tracks() to allow italics in the plot titles works well if you work with expression class objects, but I found an additional issue. I need to generate several plots and instead of writing each gene name manually, I would like to parse ...
written 2.6 years ago by oswaldo.lorenzo10 • updated 2.6 years ago by Michael Lawrence11k
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... Dear Michael Lawrence, I posted this comment as a new question. It was really long. Thanks, Oswaldo ...
written 2.6 years ago by oswaldo.lorenzo10
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... This issue was solved by Michael Lawrence in ggbio 1.21.6 version. Thanks ...
written 2.9 years ago by oswaldo.lorenzo10
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... I'm trying to combine plain text with italic text in the title of a combined tracks() plot generated by ggbio, but I can not include the part of the title that I want in italic fonts. Here you have several examples of titles that allow italics using expression(italic(x)) and the last one is the one ...
written 2.9 years ago by oswaldo.lorenzo10
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... This question was answered by aosmith in the following link: http://stackoverflow.com/questions/39535088/missing-levels-in-legend-using-autoplot-scale-color-manual-functions. ...
written 2.9 years ago by oswaldo.lorenzo10
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... Hello, I'm trying to plot three different bed files (one with SNP data, another one with deletions and a third one with duplication data), but I cannot manage the legend to contain the values of the three layers unless I put the data altogether in the same file. The problem about combining the thre ...
written 2.9 years ago by oswaldo.lorenzo10

#### Latest awards to oswaldo.lorenzo

Scholar 2.9 years ago, created an answer that has been accepted. For A: ggbio tracks() function handling x axis in the wrong way
Scholar 2.9 years ago, created an answer that has been accepted. For A: How to show chromosome position and SNP label at the same time in x axis

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