User: minervajunjun

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Posts by minervajunjun

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ChIPQC BiocParallel errors
... Hi, I was running ChIPQC version ‘1.20.0’ under R version 3.6.0. I try to use ChIPQC() to construct an ChIPQCexperiment object, however it gives an error "Calculating shift for chr1 300 / 300 Error: BiocParallel errors element index: 1, 2, 3, 4 first error: subscript contains out-of-bounds ra ...
biocparallel chipqc chipqc error written 6 weeks ago by minervajunjun0
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Comment: C: read count summed over exons is greater tham the gene-level read count using fea
... To be more specific, is this because in the command, both "useMetaFeatures" and "allowMultiOverlap" are set true? If one only set "useMetaFeatures" true and "allowMultiOverlap" false, then the summed counts over exonic should be smaller than gene level? (in manual, it says if at meta feature level, ...
written 13 months ago by minervajunjun0

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