## User: yingchen

yingchen0
Reputation:
0
Status:
New User
Location:
Last seen:
2 years, 2 months ago
Joined:
2 years, 2 months ago
Email:
y*******@outlook.com

#### Posts by yingchen

<prev • 2 results • page 1 of 1 • next >
1
569
views
1
... Hi Monther, Thanks a lot for the explanation! I have another question, what is the recommended cut-off for significant DE gene sets and pathways? When I used GAGE for the same data set, in 1 contrast, there are only 13 kegg pathways with q.val <= 0.01. When I did the analysis with EGSEA, the q. ...
written 2.2 years ago by yingchen0
1
569
views
1
... Hi guys, I tried the EGSEA package and was hoping to find a better way to do the GSEA. The output column Direction under gsa$mylabel$test.results\$mycontrast gives values 1,0, -1. I assume that -1 means the gene set/pathway is down-regulated and 1 means it's up-regulated. My problem is that most of ...
written 2.2 years ago by yingchen0 • updated 2.2 years ago by Monther Alhamdoosh40

#### Latest awards to yingchen

No awards yet. Soon to come :-)

Content
Help
Access

Use of this site constitutes acceptance of our User Agreement and Privacy Policy.