User: niuyw

gravatar for niuyw
niuyw0
Reputation:
0
Status:
New User
Location:
Beijing, China
Last seen:
1 day, 8 hours ago
Joined:
1 year, 11 months ago
Email:
x*************@qq.com

Posts by niuyw

<prev • 4 results • page 1 of 1 • next >
0
votes
1
answers
382
views
1
answers
Comment: C: How to make a MotifDb object from pwm/pfm files?
... Sorry for the late reply. It's a good guide! Well, it's difficult for me to obtain all the metadata needed. I'm not familiar with TFs. Very looking forward to the new version of MotifDb. ...
written 10 months ago by niuyw0
0
votes
1
answer
382
views
1
answer
How to make a MotifDb object from pwm/pfm files?
... Hi, I'm using package MotifDb. It contains thousands motifs of transcription factors from various sources (e.g. JASPAR, CIS-BP etc.), and is very convenient. My question is: can I create a MotifDb object from pwm/pfm files? Sometimes using motifs not in the package is needed. Thanks! Yiwei Niu ...
motifdb written 12 months ago by niuyw0 • updated 12 months ago by Paul Shannon360
0
votes
1
answers
817
views
1
answers
Comment: C: How featureCounts define the gene length
... Thanks! According the doc of featureCounts, it's the total number of intersection of exons that belong to the gene, not the total number of DNA bases that belong to any exon for that gene. ...
written 23 months ago by niuyw0
0
votes
1
answer
817
views
1
answer
How featureCounts define the gene length
... Hi, I'm using featureCounts from the Rsubread package. But I have a question about the gene length returned by featrureCounts. I've read the case study here: http://bioinf.wehi.edu.au/RNAseqCaseStudy/, and the combination of featureCounts and edgeR is wonderful. We often need to get the R/FPKM value ...
rnaseq rsubread featurecounts written 23 months ago by niuyw0 • updated 23 months ago by Gordon Smyth35k

Latest awards to niuyw

No awards yet. Soon to come :-)

Help
Access

Use of this site constitutes acceptance of our User Agreement and Privacy Policy.
Powered by Biostar version 2.2.0
Traffic: 338 users visited in the last hour