User: Francesca

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Francesca0
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Posts by Francesca

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Comment: C: Analysis of RNA-seq time series with edgeR
... Hi Aaron, thanks a lot for your reply! I am indeed using this approach, but I wonder if there is a better solution than computing these three lists of DE genes and then merging them in with some logical rule (e.g. A1-list & A2-list & !B-list). ...
written 17 months ago by Francesca0
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Analysis of RNA-seq time series with edgeR
... Hi all, We have an RNA-seq time-series over three time points, measuring the response of a cell line to three treatments (A1, A2 and B). We also have the control measurements, over the same time points plus the time 0h (treatments were applied after 0h). We have three biological replicates for each ...
timecourse edger differential expression time course rna-seq written 17 months ago by Francesca0 • updated 17 months ago by Aaron Lun19k

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