User: fizer

gravatar for fizer
fizer30
Reputation:
30
Status:
New User
Location:
US
Last seen:
9 months, 2 weeks ago
Joined:
10 months, 3 weeks ago
Email:
f************@gmail.com

Posts by fizer

<prev • 3 results • page 1 of 1 • next >
6
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plotDEXSeq error in plot.window(xlim = c(0, 1), ylim = c(0, max(matr))) : need finite 'ylim' values
... Hi, I am getting an error while plotting dexseq results. I ran dexseq in a very usual way and make good plots but this time I am not sure where and what is wrong with plotting.  Error in plot.window(xlim = c(0, 1), ylim = c(0, max(matr))) :    need finite 'ylim' values In addition: Warning message ...
dexseq differential exon usage written 9 months ago by fizer30
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1
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Simultaneously adding two different covariates in the model gives error in DESeq2.
... Hello, I have rnaseq data generated from brain tissues of 100 individuals, half of them were affected by a disease. All the samples were mix of two different brain regions, obtained from 4 different providers. I am trying to run DESeq2 to identify  differentially expressed genes using the model lik ...
rnaseq dexseq deseq2 differential gene expression differential exon usage written 10 months ago by fizer30 • updated 10 months ago by Michael Love15k
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GO enrichment comparison with other programs
... Hi, The comparison done in the  "functional enrichment for GTEx paper". I wonder if there is a way to do the comparison using enrichment results that are contained in data.frames? For example, clusterprofiler vs goseq vs topGO. Thanks ...
clusterprofiler enrichment analysis written 10 months ago by fizer30 • updated 10 months ago by Guangchuang Yu800

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