User: alerodriguez

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Posts by alerodriguez

<prev • 15 results • page 2 of 2 • next >
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Comment: C: SVA: Including variable of interest in ComBat model matrix
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written 2.2 years ago by alerodriguez0
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Comment: C: Error in TOMplot (WGCNA)
... Abhishek,  Did you ever get a response from the authors? Thanks!         ...
written 2.3 years ago by alerodriguez0
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Comment: C: expression correlation on an ExpressionSet
... Thanks!  I was told that to do an expression correlation (case/control) all I needed was Excel. Can you give me your thoughts about my approach, I started with .txt files and build an ExpressionSet ( is this what people normally do?) I did this because reading the Affy and other vignettes I was able ...
written 2.6 years ago by alerodriguez0
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Answer: A: expression correlation on an ExpressionSet
... I want to know if the expression of all genes in the controls differs from those in the cases.  I would like to visualize this with a heat map.     ...
written 2.6 years ago by alerodriguez0
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expression correlation on an ExpressionSet
... Hi, I have .txt files with phenotype data and expression values from an Affymetrix microarray. I constructed an ExpressionSet class from scratch. I need to generate and plot an expression correlation matrix for all genes comparing case vs control.I'm very new to R and Bioconductor and would greatly ...
plot expressionset correlation casecontrol written 2.6 years ago by alerodriguez0 • updated 2.3 years ago by vulegom0

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